RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 PQLC3Q8N755 202 aa12.62□□□□□ -0.39
CKS2-201ENST00000314355 ARRDC2Q8TBH0 407 aa12.62□□□□□ -0.39
CKS2-201ENST00000314355 SCAMP4Q969E2 229 aa12.62□□□□□ -0.39
CKS2-201ENST00000314355 SH3KBP1Q96B97 665 aa12.62□□□□□ -0.39
CKS2-201ENST00000314355 CRELD1Q96HD1 420 aa12.62□□□□□ -0.39
CKS2-201ENST00000314355 PRR11Q96HE9 360 aaPredicted RBP12.62□□□□□ -0.39
CKS2-201ENST00000314355 LYSMD1Q96S90 227 aa12.62□□□□□ -0.39
CKS2-201ENST00000314355 SLC38A3Q99624 504 aa12.62□□□□□ -0.39
CKS2-201ENST00000314355 GPR63Q9BZJ6 419 aa12.62□□□□□ -0.39
CKS2-201ENST00000314355 RMI1Q9H9A7 625 aa12.62□□□□□ -0.39
CKS2-201ENST00000314355 KCNK4Q9NYG8 393 aa12.62□□□□□ -0.39
CKS2-201ENST00000314355 RABGEF1Q9UJ41 708 aa12.62□□□□□ -0.39
CKS2-201ENST00000314355 ATXN7L1Q9ULK2 861 aaPredicted RBP12.62□□□□□ -0.39
CKS2-201ENST00000314355 LOXL2Q9Y4K0 774 aa12.62□□□□□ -0.39
CKS2-201ENST00000314355 PCDHGA7Q9Y5G6 932 aa12.62□□□□□ -0.39
CKS2-201ENST00000314355 CHD6Q8TD26 2715 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 CDRT15L2A8MXV6 281 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 ERVH48-1M5A8F1 160 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 ATXN7O15265 892 aaPredicted RBP12.61□□□□□ -0.39
CKS2-201ENST00000314355 MTSS1O43312 755 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 MTA2O94776 668 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 HOXB3P14651 431 aaPredicted RBP12.61□□□□□ -0.39
CKS2-201ENST00000314355 SLC5A2P31639 672 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 CETN2P41208 172 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 STC1P52823 247 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 MAPK10P53779 464 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 NAP1L1P55209 391 aaKnown RBP12.61□□□□□ -0.39
CKS2-201ENST00000314355 OR1D5P58170 312 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 DYNLT1P63172 113 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 IFI35P80217 286 aaPredicted RBP12.61□□□□□ -0.39
CKS2-201ENST00000314355 CDK18Q07002 472 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 NIPAL4Q0D2K0 466 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 SLC10A2Q12908 348 aaPredicted RBP12.61□□□□□ -0.39
CKS2-201ENST00000314355 PYCR3Q53H96 274 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 SLC9A4Q6AI14 798 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 NYAP1Q6ZVC0 841 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 USP53Q70EK8 1073 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 CHST15Q7LFX5 561 aaPredicted RBP12.61□□□□□ -0.39
CKS2-201ENST00000314355 KDELC2Q7Z4H8 507 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 CLEC14AQ86T13 490 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 PELI3Q8N2H9 469 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 ZSCAN1Q8NBB4 408 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 AVL9Q8NBF6 648 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 OR10G6Q8NH81 332 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 P3H4Q92791 437 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 AGAP3Q96P47 875 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 CCNL2Q96S94 520 aaPredicted RBP12.61□□□□□ -0.39
CKS2-201ENST00000314355 SPATA16Q9BXB7 569 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.61□□□□□ -0.39
CKS2-201ENST00000314355 VPS18Q9P253 973 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 RP1P56715 2156 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 SHROOM3Q8TF72 1996 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 LRRK1Q38SD2 2015 aa12.61□□□□□ -0.39
CKS2-201ENST00000314355 A0A0A6YYK5 440 aaPredicted RBP12.6□□□□□ -0.39
CKS2-201ENST00000314355 OR5K4A6NMS3 321 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 NVLO15381 856 aaKnown RBP12.6□□□□□ -0.39
CKS2-201ENST00000314355 ZRANB2O95218 330 aaKnown RBP eCLIP12.6□□□□□ -0.396e-12■■■■□ 20.7
CKS2-201ENST00000314355 SLC25A14O95258 325 aaPredicted RBP12.6□□□□□ -0.39
CKS2-201ENST00000314355 COMTP21964 271 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 CD82P27701 267 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 CSTF2P33240 577 aaKnown RBP eCLIP12.6□□□□□ -0.39
CKS2-201ENST00000314355 SPINT3P49223 89 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 MAZP56270 477 aaKnown RBP12.6□□□□□ -0.39
CKS2-201ENST00000314355 GPLD1P80108 840 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 B4GALNT1Q00973 533 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 ZFP36L1Q07352 338 aaKnown RBP12.6□□□□□ -0.39
CKS2-201ENST00000314355 TRA2AQ13595 282 aaKnown RBP eCLIP12.6□□□□□ -0.39
CKS2-201ENST00000314355 PTPRRQ15256 657 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 PCSK7Q16549 785 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 QPCTQ16769 361 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 TEX44Q53QW1 395 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 CCDC181Q5TID7 509 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 KAZNQ674X7 775 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 KCTD16Q68DU8 428 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 B3GNT8Q7Z7M8 397 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 SLC9B2Q86UD5 537 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 NRROSQ86YC3 692 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 CPNE8Q86YQ8 564 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 CCDC50Q8IVM0 306 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 CCDC170Q8IYT3 715 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 RCOR2Q8IZ40 523 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 NAGSQ8N159 534 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 PLD5Q8N7P1 536 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 LRRN4Q8WUT4 740 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 TFB1MQ8WVM0 346 aaKnown RBP12.6□□□□□ -0.39
CKS2-201ENST00000314355 SCARF2Q96GP6 870 aaPredicted RBP12.6□□□□□ -0.39
CKS2-201ENST00000314355 CALR3Q96L12 384 aaKnown RBP12.6□□□□□ -0.39
CKS2-201ENST00000314355 TTC25Q96NG3 672 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 ZSCAN5AQ9BUG6 496 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 SLC25A51Q9H1U9 297 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 CPNE5Q9HCH3 593 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 MAGEE1Q9HCI5 957 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 ASPMQ8IZT6 3477 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 CFAP47Q6ZTR5 3102 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 SPEGQ15772 3267 aa12.6□□□□□ -0.39
CKS2-201ENST00000314355 DMXL2Q8TDJ6 3036 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 TRBV23OR9-2A0A075B6M9 112 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 A0A0U1RQS6 177 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 GPR89AB7ZAQ6 455 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 AGRPO00253 132 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms