RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 DSG4Q86SJ6 1040 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 TOP6BLQ8N6T0 577 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 TMCO6Q96DC7 493 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 RACGAP1Q9H0H5 632 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 DPP7Q9UHL4 492 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 TRPV2Q9Y5S1 764 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 GPC6Q9Y625 555 aaPredicted RBP13.13□□□□□ -0.31
SNED1-201ENST00000310397 RGS20O76081 388 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 NR2F1P10589 423 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 FAM131AQ6UXB0 335 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 ARRDC4Q8NCT1 418 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 PEX16Q9Y5Y5 336 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 MYPNQ86TC9 1320 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.13□□□□□ -0.31
SNED1-201ENST00000310397 FAUP35544 74 aaKnown RBP13.13□□□□□ -0.31
SNED1-201ENST00000310397 STARP49675 285 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 CDK18Q07002 472 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 RALGDSQ12967 914 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 PDCD4Q53EL6 469 aaKnown RBP13.13□□□□□ -0.31
SNED1-201ENST00000310397 XKR6Q5GH73 641 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 STYXQ8WUJ0 223 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 YTHDF1Q9BYJ9 559 aaKnown RBP13.13□□□□□ -0.31
SNED1-201ENST00000310397 FAM198AQ9UFP1 575 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 DGKBQ9Y6T7 804 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 U3KQV3 271 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 LIPEQ05469 1076 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 TRIM32Q13049 653 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 HECTD2Q5U5R9 776 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 TAPT1Q6NXT6 567 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 ZZZ3Q8IYH5 903 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 FAR1Q8WVX9 515 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 TMEM138Q9NPI0 162 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 COQ6Q9Y2Z9 468 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 POLR3HQ9Y535 204 aaPredicted RBP13.13□□□□□ -0.31
SNED1-201ENST00000310397 FAM92AA1XBS5 289 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 KHDRBS3O75525 346 aaKnown RBP13.13□□□□□ -0.31
SNED1-201ENST00000310397 ADRA1BP35368 520 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 PSEN2P49810 448 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 CPSF6Q16630 551 aaKnown RBP eCLIP13.13□□□□□ -0.31
SNED1-201ENST00000310397 KCTD8Q6ZWB6 473 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 ELMO1Q92556 727 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 TOP1MTQ969P6 601 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 NR2E1Q9Y466 385 aa13.13□□□□□ -0.31
SNED1-201ENST00000310397 ADAMDEC1O15204 470 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 CHST10O43529 356 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 LCP2Q13094 533 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 FAM117BQ6P1L5 589 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 FAM180AQ6UWF9 173 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 ZBTB46Q86UZ6 589 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 NUP205Q92621 2012 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 PHF12Q96QT6 1004 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 MAGEE1Q9HCI5 957 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.12□□□□□ -0.31
SNED1-201ENST00000310397 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.12□□□□□ -0.31
SNED1-201ENST00000310397 CILPO75339 1184 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 CYP7B1O75881 506 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 GBE1Q04446 702 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 TRAPPC5Q8IUR0 188 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 NXNL1Q96CM4 212 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 AGAP2Q99490 1192 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 FNDC11Q9BVV2 318 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 LRTM1Q9HBL6 345 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 SLC7A8Q9UHI5 535 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 MRPS7Q9Y2R9 242 aaKnown RBP13.12□□□□□ -0.31
SNED1-201ENST00000310397 COL1A2P08123 1366 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 LSM1O15116 133 aaKnown RBP13.12□□□□□ -0.31
SNED1-201ENST00000310397 AP5B1Q2VPB7 878 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 PPM1JQ5JR12 505 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 SCIMPQ6UWF3 145 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 GJD3Q8N144 294 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 SUCOQ9UBS9 1254 aaKnown RBP13.12□□□□□ -0.31
SNED1-201ENST00000310397 KIR3DL1P43629 444 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 FAM20CQ8IXL6 584 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 CCDC36Q8IYA8 594 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 GPATCH1Q9BRR8 931 aaKnown RBP13.12□□□□□ -0.31
SNED1-201ENST00000310397 INTS10Q9NVR2 710 aaKnown RBP13.12□□□□□ -0.31
SNED1-201ENST00000310397 SNX7Q9UNH6 387 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 SCN11AQ9UI33 1791 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 MTAPQ13126 283 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 RNF19BQ6ZMZ0 732 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 TRPV1Q8NER1 839 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 CLP1Q92989 425 aaKnown RBP13.12□□□□□ -0.31
SNED1-201ENST00000310397 CASKO14936 926 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 SLC22A1O15245 554 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 CHRNB2P17787 502 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 GRM5P41594 1212 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 CPTPQ5TA50 214 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 VWA5B1Q5TIE3 1220 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 C9orf57Q5W0N0 161 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 PACRGLQ8N7B6 248 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 COQ10BQ9H8M1 238 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 TRIM17Q9Y577 477 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 UNGP13051 313 aaPredicted RBP13.12□□□□□ -0.31
SNED1-201ENST00000310397 CREB1P16220 341 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 WDR4P57081 412 aaKnown RBP13.12□□□□□ -0.31
SNED1-201ENST00000310397 CXCL9Q07325 125 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 ASB9Q96DX5 294 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 SPG21Q9NZD8 308 aa13.12□□□□□ -0.31
SNED1-201ENST00000310397 MRC1P22897 1456 aa13.11□□□□□ -0.31
SNED1-201ENST00000310397 CCDC189A1A4V9 331 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms