RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 TP53BP1Q12888 1972 aaPredicted RBP4.96□□□□□ -1.61
CKS1B-201ENST00000308987 A0A0B4J269 797 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 IQANK1A0A1B0GTG1 560 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 CCDC189A1A4V9 331 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 MTMR11A4FU01 709 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 SIGLEC16A6NMB1 481 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 A8MXQ7 604 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 F8W8V4 182 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 K7ERI5 159 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 DCLK1O15075 740 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 OAZ2O95190 189 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 EPN2O95208 641 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 KCNK5O95279 499 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 VNN1O95497 513 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 ASS1P00966 412 aaKnown RBP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 RPSAP08865 295 aaKnown RBP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 DHRS4L1P0CG22 281 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 CXCL8P10145 99 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 HARSP12081 509 aaKnown RBP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 ATF6P18850 670 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 TNNI1P19237 187 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 HOXA6P31267 233 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 STIP1P31948 543 aaKnown RBP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 RPL9P32969 192 aaKnown RBP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 RPA3P35244 121 aaPredicted RBP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 VHLP40337 213 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 TNFSF9P41273 254 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 PIK3CAP42336 1068 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 CDKN2BP42772 138 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 LIG4P49917 911 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 EFNA5P52803 228 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 RPL11P62913 178 aaKnown RBP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 NOP14P78316 857 aaKnown RBP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 SLC18A2Q05940 514 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 GPS1Q13098 491 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 DNAJC3Q13217 504 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 TAF11Q15544 211 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 TRIP13Q15645 432 aaPredicted RBP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 TBCCQ15814 346 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 SEPT7Q16181 437 aaKnown RBP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 HADHQ16836 314 aaKnown RBP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 CYP4A22Q5TCH4 519 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 STPG1Q5TH74 334 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 MBLAC2Q68D91 279 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 FSTL4Q6MZW2 842 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 ZNF280DQ6N043 979 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 IRGCQ6NXR0 463 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 DNAJC24Q6P3W2 148 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 POMZP3Q6PJE2 187 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 LVRNQ6Q4G3 990 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 MFSD7Q6UXD7 560 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 FAM47EQ6ZV65 393 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 NLRP9Q7RTR0 991 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 OTOAQ7RTW8 1153 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 DNAJB7Q7Z6W7 309 aaPredicted RBP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 CLNKQ7Z7G1 428 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 WDR49Q8IV35 697 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 BRSK2Q8IWQ3 736 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 KBTBD2Q8IY47 623 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 PDIK1LQ8N165 341 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 ARHGEF39Q8N4T4 335 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 ZNF276Q8N554 614 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 NAT8LQ8N9F0 302 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 BANPQ8N9N5 519 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 STKLD1Q8NE28 680 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 OR10T2Q8NGX3 314 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 PYROXD1Q8WU10 500 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 GAB3Q8WWW8 586 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 ZNF606Q8WXB4 792 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 PRCCQ92733 491 aaPredicted RBP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 ZNF503Q96F45 646 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 BICD1Q96G01 975 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 ZNF512Q96ME7 567 aaPredicted RBP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 ACAP3Q96P50 834 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 NUDCD1Q96RS6 583 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 C11orf70Q9BRQ4 267 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 SIKE1Q9BRV8 207 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 FAM213AQ9BRX8 229 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 BTBD10Q9BSF8 475 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 HEMGNQ9BXL5 484 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 SLC46A2Q9BY10 475 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 TRIM55Q9BYV6 548 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 LHX5Q9H2C1 402 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 C8orf33Q9H7E9 229 aaPredicted RBP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 VPS37BQ9H9H4 285 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 ACP6Q9NPH0 428 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 ASAH2Q9NR71 780 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 TOPORSQ9NS56 1045 aaPredicted RBP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 FTSJ1Q9UET6 329 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 CHORDC1Q9UHD1 332 aaPredicted RBP4.96□□□□□ -1.62
CKS1B-201ENST00000308987 TBK1Q9UHD2 729 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 ZFP69BQ9UJL9 534 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 ZNF180Q9UJW8 692 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 ANGPTL2Q9UKU9 493 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 DNPEPQ9ULA0 475 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 CCL26Q9Y258 94 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 STK38LQ9Y2H1 464 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 COL12A1Q99715 3063 aa4.96□□□□□ -1.62
CKS1B-201ENST00000308987 TMEM131Q92545 1883 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms