RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 TMTC1Q8IUR5 882 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 EXD1Q8NHP7 514 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 FGF11Q92914 225 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 GRAMD1AQ96CP6 724 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 HAUS2Q9NVX0 235 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 TAAR2Q9P1P5 351 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 MOSPD1Q9UJG1 213 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 SATB2Q9UPW6 733 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 GOLGA6CA6NDK9 693 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 GOLGA6BA6NDN3 693 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 BTNL10A8MVZ5 291 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 B4DGG1 531 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 D6RAR5 112 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 PJA2O43164 708 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 DNAJC6O75061 913 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 ZRANB2O95218 330 aaKnown RBP eCLIP19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 GOLGA6DP0CG33 693 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 PNLIPP16233 465 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 CTNNA1P35221 906 aaKnown RBP19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 NR1D2Q14995 579 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 SPA17Q15506 151 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 KAZNQ674X7 775 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 DOK6Q6PKX4 331 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 KDELC1Q6UW63 502 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 BBS12Q6ZW61 710 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 ZNF438Q7Z4V0 828 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 SPRED1Q7Z699 444 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 RCOR2Q8IZ40 523 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 NAGSQ8N159 534 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 LRRC57Q8N9N7 239 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 ACRBPQ8NEB7 543 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 OR6C4Q8NGE1 309 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 PATE1Q8WXA2 126 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 ANP32EQ9BTT0 268 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 GOLGA6AQ9NYA3 693 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 SEPT10Q9P0V9 454 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 NFKBIL1Q9UBC1 381 aaPredicted RBP19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 SPO11Q9Y5K1 396 aa19.7■□□□□ 0.74
PDZRN3-202ENST00000308537 A0A0U1RQJ8 604 aa19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 NUDT21O43809 227 aaKnown RBP19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 PYGLP06737 847 aa19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 PIRTP0C851 137 aa19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 MAZP56270 477 aaKnown RBP19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 B4GALNT1Q00973 533 aa19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 CDK18Q07002 472 aa19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 SPIDRQ14159 915 aa19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 TMC3Q7Z5M5 1100 aa19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 GPR26Q8NDV2 337 aa19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 TFB1MQ8WVM0 346 aaKnown RBP19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 ZNF578Q96N58 590 aaPredicted RBP19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 QKIQ96PU8 341 aaKnown RBP eCLIP19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 GORASP1Q9BQQ3 440 aa19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 GSDMCQ9BYG8 508 aa19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 LRRN3Q9H3W5 708 aa19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 DPEP2Q9H4A9 486 aa19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 SUDS3Q9H7L9 328 aaPredicted RBP19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 MAGEE1Q9HCI5 957 aa19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 PCDHGA8Q9Y5G5 932 aa19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 PCDHA3Q9Y5H8 950 aa19.69■□□□□ 0.74
PDZRN3-202ENST00000308537 ATRXP46100 2492 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 LOC285095A0A1B0GVY8 99 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 RGSL1A5PLK6 1076 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 AURKAO14965 403 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 INPP4BO15327 924 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 B4GAT1O43505 415 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 ATP1A1P05023 1023 aaKnown RBP19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 RPLP0P05388 317 aaKnown RBP19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 NFKB1P19838 968 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 ACTN2P35609 894 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 ILF3Q12906 894 aaKnown RBP eCLIP19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 C3orf38Q5JPI3 329 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 KDELC2Q7Z4H8 507 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 DAAM2Q86T65 1068 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 PDZD3Q86UT5 571 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 CCNJLQ8IV13 435 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 ZNF567Q8N184 647 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 ALG3Q92685 438 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 HAUS1Q96CS2 278 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 LIN37Q96GY3 246 aaPredicted RBP19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 OXNAD1Q96HP4 312 aaPredicted RBP19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 SLC46A1Q96NT5 459 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 DCBLD2Q96PD2 775 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 OR2M4Q96R27 311 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 ADGRE3Q9BY15 652 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 FAM83DQ9H4H8 585 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 ZFYVE1Q9HBF4 777 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 VPS18Q9P253 973 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 LRIT1Q9P2V4 623 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 SHOC2Q9UQ13 582 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 ZNF711Q9Y462 761 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 ADGRG1Q9Y653 693 aa19.68■□□□□ 0.74
PDZRN3-202ENST00000308537 GRID2IPA4D2P6 1211 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 CDRT15L2A8MXV6 281 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 ECEL1O95672 775 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 NDST3O95803 873 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 EML2O95834 649 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 HOXB3P14651 431 aaPredicted RBP19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 CTNNA2P26232 953 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 CCKBRP32239 447 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 DCDC1P59894 354 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms