RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 ATOH8Q96SQ7 321 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 GPR21Q99679 349 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 C17orf80Q9BSJ5 609 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 REV3LO60673 3130 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 HELZP42694 1942 aaKnown RBP6.52□□□□□ -1.37
USP47-201ENST00000305481 GBF1Q92538 1859 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 SLCO1B7G3V0H7 640 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 UBXN8O00124 270 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 PPP6CO00743 305 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 SDHDO14521 159 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 MAGEC1O60732 1142 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 NIPSNAP2O75323 286 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 SIX3O95343 332 aaPredicted RBP6.52□□□□□ -1.37
USP47-201ENST00000305481 PENKP01210 267 aaPredicted RBP6.52□□□□□ -1.37
USP47-201ENST00000305481 SRCP12931 536 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 EPCAMP16422 314 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 SERPINB5P36952 375 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 RAP1GDS1P52306 607 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 EPHB1P54762 984 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 C1QTNF8P60827 252 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 NTHL1P78549 312 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 ILF2Q12905 390 aaKnown RBP6.52□□□□□ -1.37
USP47-201ENST00000305481 KPNB1Q14974 876 aaKnown RBP6.52□□□□□ -1.37
USP47-201ENST00000305481 EML3Q32P44 896 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 FUT11Q495W5 492 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 ZRANB3Q5FWF4 1079 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 PITRM1Q5JRX3 1037 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 RHEBL1Q8TAI7 183 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 NAT14Q8WUY8 206 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 STON2Q8WXE9 905 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 MCUR1Q96AQ8 359 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 ZSWIM3Q96MP5 696 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 LENG8Q96PV6 779 aaPredicted RBP6.52□□□□□ -1.37
USP47-201ENST00000305481 GCNAQ96QF7 691 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 LINC00597Q9H2U6 94 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 TAS2R13Q9NYV9 303 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 HACD3Q9P035 362 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 RPL26L1Q9UNX3 145 aaKnown RBP6.52□□□□□ -1.37
USP47-201ENST00000305481 SLC4A7Q9Y6M7 1214 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 TRANK1O15050 2925 aa6.52□□□□□ -1.37
USP47-201ENST00000305481 A0A088AWK7 358 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 A0A0J9YYE9 177 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 IQCF5A8MTL0 148 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 TM7SF2O76062 418 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 TRBC1P01850 177 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 RHOP08100 348 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 PKMP14618 531 aaKnown RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 MYOGP15173 224 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 PFKLP17858 780 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 HNF1BP35680 557 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 TTPAP49638 278 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 COPAP53621 1224 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 HERVK_113P63132 956 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 BTKQ06187 659 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 ACSBG2Q5FVE4 666 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 CUZD1Q86UP6 607 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 SLC22A9Q8IVM8 553 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 CPSF7Q8N684 471 aaKnown RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 SIDT2Q8NBJ9 832 aaKnown RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 THTPAQ9BU02 230 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 TMEM106CQ9BVX2 250 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 ERVK-6Q9BXR3 956 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 DERL2Q9GZP9 239 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 P2RY12Q9H244 342 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 TFB2MQ9H5Q4 396 aaKnown RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 RNPEPL1Q9HAU8 725 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 GTSE1Q9NYZ3 720 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 PRRC2BQ5JSZ5 2229 aaKnown RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 LINC01553A4QN01 128 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 CDC7O00311 574 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 GRM6O15303 877 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 COX4I1P13073 169 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 CDH13P55290 713 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 SH3BP2P78314 561 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 SEMG2Q02383 582 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 BCL2L1Q07817 233 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 GALNT1Q10472 559 aaPredicted RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 UGT3A2Q3SY77 523 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 ACCSLQ4AC99 568 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 WLSQ5T9L3 541 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 ULK2Q8IYT8 1036 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 ZNF513Q8N8E2 541 aaPredicted RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 PTGR2Q8N8N7 351 aaPredicted RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 ENDOVQ8N8Q3 282 aaKnown RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 GRIN3AQ8TCU5 1115 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 CD200R1Q8TD46 325 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 MYLIPQ8WY64 445 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 HERVK_113Q902F9 699 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 EXT2Q93063 718 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 KIAA1191Q96A73 305 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 FUBP1Q96AE4 644 aaKnown RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 MARK4Q96L34 752 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 NSUN5Q96P11 429 aaKnown RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 CCDC28BQ9BUN5 200 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 GPR63Q9BZJ6 419 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 IL26Q9NPH9 171 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 SLC7A8Q9UHI5 535 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 G3BP2Q9UN86 482 aaKnown RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 CDYLQ9Y232 598 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 HS3ST2Q9Y278 367 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms