RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 ANKRD6Q9Y2G4 727 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 CACNB4O00305 520 aaPredicted RBP24.35■■□□□ 1.49
HOXC9-201ENST00000303450 TP73O15350 636 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 LRP3O75074 770 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 SOD1P00441 154 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 PDE1CQ14123 709 aaPredicted RBP24.35■■□□□ 1.49
HOXC9-201ENST00000303450 DNAJC21Q5F1R6 531 aaKnown RBP24.35■■□□□ 1.49
HOXC9-201ENST00000303450 ASCL5Q7RTU5 278 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 HEATR4Q86WZ0 1026 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 MPP5Q8N3R9 675 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 PHPT1Q9NRX4 125 aaPredicted RBP24.35■■□□□ 1.49
HOXC9-201ENST00000303450 APPL1Q9UKG1 709 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 RIMKLBQ9ULI2 386 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 ESYT3A0FGR9 886 aa24.34■■□□□ 1.49
HOXC9-201ENST00000303450 CCL22O00626 93 aa24.34■■□□□ 1.49
HOXC9-201ENST00000303450 ZNF806P0C7X5 589 aa24.34■■□□□ 1.49
HOXC9-201ENST00000303450 ARL4CP56559 192 aa24.34■■□□□ 1.49
HOXC9-201ENST00000303450 IRX4P78413 519 aa24.34■■□□□ 1.49
HOXC9-201ENST00000303450 FNBP1LQ5T0N5 605 aa24.34■■□□□ 1.49
HOXC9-201ENST00000303450 ARMC3Q5W041 872 aa24.34■■□□□ 1.49
HOXC9-201ENST00000303450 TCEAL6Q6IPX3 200 aa24.34■■□□□ 1.49
HOXC9-201ENST00000303450 ADAMTSL4Q6UY14 1074 aa24.34■■□□□ 1.49
HOXC9-201ENST00000303450 LRRN4CLQ8ND94 238 aa24.34■■□□□ 1.49
HOXC9-201ENST00000303450 PEX13Q92968 403 aa24.34■■□□□ 1.49
HOXC9-201ENST00000303450 TCEAL3Q969E4 200 aa24.34■■□□□ 1.49
HOXC9-201ENST00000303450 FUBP1Q96AE4 644 aaKnown RBP24.34■■□□□ 1.49
HOXC9-201ENST00000303450 ZNF778Q96MU6 729 aa24.34■■□□□ 1.49
HOXC9-201ENST00000303450 KIFC1Q9BW19 673 aa24.34■■□□□ 1.49
HOXC9-201ENST00000303450 EPB41L5Q9HCM4 733 aa24.34■■□□□ 1.49
HOXC9-201ENST00000303450 SEMA4GQ9NTN9 838 aa24.34■■□□□ 1.49
HOXC9-201ENST00000303450 DMGDHQ9UI17 866 aaKnown RBP24.34■■□□□ 1.49
HOXC9-201ENST00000303450 SOX13Q9UN79 622 aa24.34■■□□□ 1.49
HOXC9-201ENST00000303450 MAGEB16A2A368 324 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 FADS2P1A8MWK0 482 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 SYPP08247 313 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 HTR1BP28222 390 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 PLTPP55058 493 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 NXPH1P58417 271 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 CAV1Q03135 178 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 PTK2BQ14289 1009 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 TRADDQ15628 312 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 CHRNA6Q15825 494 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 HIF1AQ16665 826 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 KIF19Q2TAC6 998 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 PDPK2PQ6A1A2 396 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 SLC22A18ASQ8N1D0 253 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 DCLK2Q8N568 766 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 DTX3LQ8TDB6 740 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 SEC14L1Q92503 715 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 CDKN2AIPNLQ96HQ2 116 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 TEX101Q9BY14 249 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 MRM3Q9HC36 420 aaKnown RBP24.33■■□□□ 1.49
HOXC9-201ENST00000303450 FSCN3Q9NQT6 498 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 GDF3Q9NR23 364 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 SLC2A6Q9UGQ3 507 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 MAD1L1Q9Y6D9 718 aa24.33■■□□□ 1.49
HOXC9-201ENST00000303450 ZFHX2Q9C0A1 2572 aaPredicted RBP24.33■■□□□ 1.49
HOXC9-201ENST00000303450 INPP4BO15327 924 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 PRAMEF1O95521 474 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 HOXC4P09017 264 aaPredicted RBP24.32■■□□□ 1.48
HOXC9-201ENST00000303450 CDK3Q00526 305 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 DHX9Q08211 1270 aaKnown RBP24.32■■□□□ 1.48
HOXC9-201ENST00000303450 GRIK2Q13002 908 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 ITGA9Q13797 1035 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 NFATC4Q14934 902 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 BBS9Q3SYG4 887 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 OR13J1Q8NGT2 312 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 ART4Q93070 314 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 HIC2Q96JB3 615 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 SIGLEC10Q96LC7 697 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 TBATAQ96M53 351 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 PWWP2AQ96N64 755 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 LGR4Q9BXB1 951 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 FAM114A2Q9NRY5 505 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 GPR27Q9NS67 375 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 SNX11Q9Y5W9 270 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 FRYLO94915 3013 aa24.32■■□□□ 1.48
HOXC9-201ENST00000303450 EP300Q09472 2414 aaPredicted RBP24.32■■□□□ 1.48
HOXC9-201ENST00000303450 H7C0S8 307 aa24.31■■□□□ 1.48
HOXC9-201ENST00000303450 ARHGAP33O14559 1287 aa24.31■■□□□ 1.48
HOXC9-201ENST00000303450 SRP72O76094 671 aaKnown RBP24.31■■□□□ 1.48
HOXC9-201ENST00000303450 MYCLP1P12525 358 aaPredicted RBP24.31■■□□□ 1.48
HOXC9-201ENST00000303450 PSMA3P25788 255 aa24.31■■□□□ 1.48
HOXC9-201ENST00000303450 KIAA1024LP59773 190 aa24.31■■□□□ 1.48
HOXC9-201ENST00000303450 XIAPP98170 497 aa24.31■■□□□ 1.48
HOXC9-201ENST00000303450 BNC1Q01954 994 aa24.31■■□□□ 1.48
HOXC9-201ENST00000303450 CSRP2Q16527 193 aa24.31■■□□□ 1.48
HOXC9-201ENST00000303450 ATP13A5Q4VNC0 1218 aa24.31■■□□□ 1.48
HOXC9-201ENST00000303450 SPATS2Q86XZ4 545 aaKnown RBP24.31■■□□□ 1.48
HOXC9-201ENST00000303450 ZNF398Q8TD17 642 aa24.31■■□□□ 1.48
HOXC9-201ENST00000303450 ZDHHC5Q9C0B5 715 aa24.31■■□□□ 1.48
HOXC9-201ENST00000303450 SUDS3Q9H7L9 328 aaPredicted RBP24.31■■□□□ 1.48
HOXC9-201ENST00000303450 SLC30A1Q9Y6M5 507 aa24.31■■□□□ 1.48
HOXC9-201ENST00000303450 ZNF106Q9H2Y7 1883 aaKnown RBP24.31■■□□□ 1.48
HOXC9-201ENST00000303450 SPTY2D1-AS1A0A0U1RR47 76 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 GAPDHSO14556 408 aaPredicted RBP24.3■■□□□ 1.48
HOXC9-201ENST00000303450 RHOXF2BP0C7M4 288 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 KELP23276 732 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 NMBRP28336 390 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 MC4RP32245 332 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms