RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 DNAJC21Q5F1R6 531 aaKnown RBP21.07■□□□□ 0.96
SMCO4-201ENST00000298966 AGBL4Q5VU57 503 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 ARMC3Q5W041 872 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 ARHGAP36Q6ZRI8 547 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 CROCCP2Q86T23 111 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 NETO2Q8NC67 525 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 CCDC97Q96F63 343 aaPredicted RBP21.07■□□□□ 0.96
SMCO4-201ENST00000298966 APOLD1Q96LR9 279 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 AGAP3Q96P47 875 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 MYOCQ99972 504 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 C2orf49Q9BVC5 232 aaPredicted RBP21.07■□□□□ 0.96
SMCO4-201ENST00000298966 PDFQ9HBH1 243 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 GLOD4Q9HC38 313 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 PREBQ9HCU5 417 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 MED4Q9NPJ6 270 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 OGFRQ9NZT2 677 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 SEPT3Q9UH03 358 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 SARDHQ9UL12 918 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 NEMP2A6NFY4 417 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 SLC31A1O15431 190 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 TMEM63AO94886 807 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 SUN1O94901 812 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 AP2A1O95782 977 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 PSMB4P28070 264 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 GEMP55040 296 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 LBRQ14739 615 aaKnown RBP21.06■□□□□ 0.96
SMCO4-201ENST00000298966 ACCSLQ4AC99 568 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 INO80DQ53TQ3 878 aaPredicted RBP21.06■□□□□ 0.96
SMCO4-201ENST00000298966 C3orf38Q5JPI3 329 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 IGF2-ASQ6U949 168 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 LINC00523Q86TU6 105 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 TMEM145Q8NBT3 493 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 MAPK15Q8TD08 544 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 FRS2Q8WU20 508 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 LRRN4Q8WUT4 740 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 UBLCP1Q8WVY7 318 aaPredicted RBP21.06■□□□□ 0.96
SMCO4-201ENST00000298966 SLC25A51Q9H1U9 297 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 LRRC40Q9H9A6 602 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 NLGN3Q9NZ94 848 aa21.06■□□□□ 0.96
SMCO4-201ENST00000298966 UBA2Q9UBT2 640 aaPredicted RBP21.06■□□□□ 0.96
SMCO4-201ENST00000298966 K7ENP7 123 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 ALOX15BO15296 676 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 NUDT17P0C025 328 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 GIMD1P0DJR0 217 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 NFKB1P19838 968 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 CD68P34810 354 aaPredicted RBP21.05■□□□□ 0.96
SMCO4-201ENST00000298966 ACVRL1P37023 503 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 NUMBP49757 651 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 EIF3BP55884 814 aaKnown RBP21.05■□□□□ 0.96
SMCO4-201ENST00000298966 SLC20A2Q08357 652 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 MPP3Q13368 585 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 ZNF235Q14590 738 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 ISXQ2M1V0 245 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 RALGPS1Q5JS13 557 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 ANKRD22Q5VYY1 191 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 KIAA1614Q5VZ46 1190 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 RETSATQ6NUM9 610 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 INO80CQ6PI98 192 aaPredicted RBP21.05■□□□□ 0.96
SMCO4-201ENST00000298966 PRICKLE2Q7Z3G6 844 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 CCDC25Q86WR0 208 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 CNTD1Q8N815 330 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 OR7D4Q8NG98 312 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 ZIM3Q96PE6 472 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 RUFY1Q96T51 708 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 FEM1AQ9BSK4 669 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 SPON2Q9BUD6 331 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 POLR1EQ9GZS1 481 aaKnown RBP21.05■□□□□ 0.96
SMCO4-201ENST00000298966 SLC25A13Q9UJS0 675 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 SATB2Q9UPW6 733 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 SSUH2Q9Y2M2 353 aa21.05■□□□□ 0.96
SMCO4-201ENST00000298966 A0A0D9SEW6 157 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 J3KR12 359 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 SPAG6O75602 509 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 MYF5P13349 255 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 AKT2P31751 481 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 MAGEA4P43358 317 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 ALG1LQ6GMV1 187 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 LRRC8BQ6P9F7 803 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 CCNJLQ8IV13 435 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 KRT222Q8N1A0 295 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 IFI44Q8TCB0 444 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 KLK6Q92876 244 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 GRAMD1AQ96CP6 724 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 SERPINB12Q96P63 405 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 PSKH2Q96QS6 385 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 SH3GL2Q99962 352 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 DUSP23Q9BVJ7 150 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 EPB41L4BQ9H329 900 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 VPS28Q9UK41 221 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 PPM1HQ9ULR3 514 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 PLAAQ9Y263 795 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 OR51B4Q9Y5P0 310 aa21.04■□□□□ 0.96
SMCO4-201ENST00000298966 HEMK1Q9Y5R4 338 aaPredicted RBP21.04■□□□□ 0.96
SMCO4-201ENST00000298966 A0A1W2PQU0 124 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 AGPSO00116 658 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 RIPK2O43353 540 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 LZTS3O60299 673 aaPredicted RBP21.03■□□□□ 0.96
SMCO4-201ENST00000298966 TTC4O95801 387 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 HLA-DQB2P05538 268 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 ABHD2P08910 425 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms