RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 POLR3FQ9H1D9 316 aaPredicted RBP7.5□□□□□ -1.21
TSC1-201ENST00000298552 KCTD10Q9H3F6 313 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 IPPKQ9H8X2 491 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 ZNF335Q9H4Z2 1342 aaPredicted RBP7.5□□□□□ -1.21
TSC1-201ENST00000298552 ABHD14A-ACY1A0A1B0GW23 586 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 GTF2F2P13984 249 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 GDI2P50395 445 aaKnown RBP7.5□□□□□ -1.21
TSC1-201ENST00000298552 RAB27AP51159 221 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 CBWD3Q5JTY5 395 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 CBWD5Q5RIA9 395 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 FRRS1Q6ZNA5 592 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 C11orf70Q9BRQ4 267 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 SLC39A3Q9BRY0 314 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 PCSK1NQ9UHG2 260 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 KCNS2Q9ULS6 477 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 ERVK-11Q9UQG0 969 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 TRAF6Q9Y4K3 522 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 ZNF804BA4D1E1 1349 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 KCNK5O95279 499 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 FGBP02675 491 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 EIF4EP06730 217 aaKnown RBP7.5□□□□□ -1.21
TSC1-201ENST00000298552 USP46P62068 366 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 TRNP1Q6NT89 227 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 ZBTB46Q86UZ6 589 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 RASAL3Q86YV0 1011 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 FBXW8Q8N3Y1 598 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 PCSK9Q8NBP7 692 aaKnown RBP7.5□□□□□ -1.21
TSC1-201ENST00000298552 OR5T2Q8NGG2 359 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 SPRYD4Q8WW59 207 aaPredicted RBP7.5□□□□□ -1.21
TSC1-201ENST00000298552 SMARCD2Q92925 531 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 MEIS3Q99687 375 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 RSPH9Q9H1X1 276 aaPredicted RBP7.5□□□□□ -1.21
TSC1-201ENST00000298552 GAREM1Q9H706 876 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.5□□□□□ -1.21
TSC1-201ENST00000298552 TMEM9Q9P0T7 183 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 LIMD1Q9UGP4 676 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 PRR12Q9ULL5 1215 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 MRPS17Q9Y2R5 130 aaKnown RBP7.5□□□□□ -1.21
TSC1-201ENST00000298552 CADP27708 2225 aa7.5□□□□□ -1.21
TSC1-201ENST00000298552 RPIAP49247 311 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 GRIK4Q16099 956 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 RALGPS1Q5JS13 557 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 C12orf40Q86WS4 652 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 TXNDC5Q8NBS9 432 aaKnown RBP7.49□□□□□ -1.21
TSC1-201ENST00000298552 LENG9Q96B70 501 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 CREB3L1Q96BA8 519 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 PARD6BQ9BYG5 372 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 C17orf75Q9HAS0 396 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 R3HDM2Q9Y2K5 976 aaKnown RBP7.49□□□□□ -1.21
TSC1-201ENST00000298552 HEATR5AQ86XA9 2040 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 MAST1Q9Y2H9 1570 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 FAM230AA0A1W2PPH8 454 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 LILRB5O75023 590 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 ATG13O75143 517 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 PDE8BO95263 885 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 IFNA17P01571 189 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 ATP1A3P13637 1013 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 TYMPP19971 482 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 ACVR2BQ13705 512 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 FBXO39Q8N4B4 442 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 MFSD3Q96ES6 412 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 GLT1D1Q96MS3 346 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 TREX2Q9BQ50 279 aaPredicted RBP7.49□□□□□ -1.21
TSC1-201ENST00000298552 DCUN1D5Q9BTE7 237 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 TLR10Q9BXR5 811 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 EPB41L1Q9H4G0 881 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 DNMT3AQ9Y6K1 912 aaPredicted RBP7.49□□□□□ -1.21
TSC1-201ENST00000298552 MAU2Q9Y6X3 613 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 DNMT1P26358 1616 aaKnown RBP7.49□□□□□ -1.21
TSC1-201ENST00000298552 PPP1R3GB7ZBB8 358 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 CACNB4O00305 520 aaPredicted RBP7.49□□□□□ -1.21
TSC1-201ENST00000298552 CIAO1O76071 339 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 FMO5P49326 533 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 NUDT6P53370 316 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 BIDP55957 195 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 FOXK1P85037 733 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 NAIF1Q69YI7 327 aaPredicted RBP7.49□□□□□ -1.21
TSC1-201ENST00000298552 FBXO32Q969P5 355 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 RNPC3Q96LT9 517 aaKnown RBP7.49□□□□□ -1.21
TSC1-201ENST00000298552 SEC14L4Q9UDX3 406 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 TLR6Q9Y2C9 796 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 ACOT9Q9Y305 439 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 HBS1LQ9Y450 684 aaKnown RBP7.49□□□□□ -1.21
TSC1-201ENST00000298552 PLEKHM1Q9Y4G2 1056 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 PVALEFA0A1B0GWK0 134 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 C9J4A7 227 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 BOLA2-SMG1P6H3BVE0 249 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 APBA3O96018 575 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 GNB3P16520 340 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 ASMTP46597 345 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 PNLIPRP1P54315 467 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 RHOAP61586 193 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 PRR5P85299 388 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 DLG2Q15700 870 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 AP5B1Q2VPB7 878 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 ALG1LQ6GMV1 187 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 UNC5CLQ8IV45 518 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 VSTM4Q8IW00 320 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 TBC1D21Q8IYX1 336 aa7.49□□□□□ -1.21
TSC1-201ENST00000298552 OR4Q3Q8NH05 313 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms