RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 ABCC13Q9NSE7 274 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 PDCD5O14737 125 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 FOXK1P85037 733 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 FAM83AQ86UY5 434 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 TMEM161BQ8NDZ6 487 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 OR51V1Q9H2C8 321 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 JMJD7P0C870 316 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 PCNX4Q63HM2 1172 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 LINGO2Q7L985 606 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 ECHDC2Q86YB7 292 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 OSBPL3Q9H4L5 887 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 JMJD4Q9H9V9 463 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 CRTAC1Q9NQ79 661 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 SEC14L3Q9UDX4 400 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 RFXANKO14593 260 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 NARSO43776 548 aaKnown RBP12.41□□□□□ -0.42
SLX4-201ENST00000294008 STBD1O95210 358 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 MAZP56270 477 aaKnown RBP12.41□□□□□ -0.42
SLX4-201ENST00000294008 SEMA5AQ13591 1074 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 LARS2Q15031 903 aaKnown RBP12.41□□□□□ -0.42
SLX4-201ENST00000294008 GPR65Q8IYL9 337 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 UCK2Q9BZX2 261 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 VNN3Q9NY84 501 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 POLR3HQ9Y535 204 aaPredicted RBP12.41□□□□□ -0.42
SLX4-201ENST00000294008 GRM6O15303 877 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 RECQL5O94762 991 aaPredicted RBP12.41□□□□□ -0.42
SLX4-201ENST00000294008 HGFP14210 728 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 BACE1P56817 501 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 HSPB3Q12988 150 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 NFATC2Q13469 925 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 SLC2A7Q6PXP3 512 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 BARX2Q9UMQ3 279 aaPredicted RBP12.41□□□□□ -0.42
SLX4-201ENST00000294008 USP42Q9H9J4 1324 aaKnown RBP12.41□□□□□ -0.42
SLX4-201ENST00000294008 RIIAD1A6NNX1 92 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 MUSKO15146 869 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 FADS2O95864 444 aaKnown RBP12.41□□□□□ -0.42
SLX4-201ENST00000294008 TMEM11P17152 192 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 FRG1Q14331 258 aaKnown RBP12.41□□□□□ -0.42
SLX4-201ENST00000294008 PTGR2Q8N8N7 351 aaPredicted RBP12.41□□□□□ -0.42
SLX4-201ENST00000294008 NSUN4Q96CB9 384 aaKnown RBP12.41□□□□□ -0.42
SLX4-201ENST00000294008 HIF1ANQ9NWT6 349 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 MTRRQ9UBK8 725 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 HEMK1Q9Y5R4 338 aaPredicted RBP12.41□□□□□ -0.42
SLX4-201ENST00000294008 INSRP06213 1382 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 NKRFO15226 690 aaKnown RBP eCLIP12.4□□□□□ -0.42
SLX4-201ENST00000294008 RPL22P35268 128 aaKnown RBP12.4□□□□□ -0.42
SLX4-201ENST00000294008 EPHA10Q5JZY3 1008 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 ZNF565Q8N9K5 539 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 CUEDC1Q9NWM3 386 aaPredicted RBP12.4□□□□□ -0.42
SLX4-201ENST00000294008 CHMP24386 653 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 GPD2P43304 727 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 WSCD1Q658N2 575 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 PGM2L1Q6PCE3 622 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 CFAP206Q8IYR0 622 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 TMEM125Q96AQ2 219 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 SLC39A8Q9C0K1 460 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 DNAJC28Q9NX36 388 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 CORO2BQ9UQ03 480 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 OR1F1O43749 312 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 HNF1BP35680 557 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 CXCR3P49682 368 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 SPATC1Q76KD6 591 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 WDR49Q8IV35 697 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 ZNF557Q8N988 423 aaPredicted RBP12.4□□□□□ -0.42
SLX4-201ENST00000294008 OR6K6Q8NGW6 343 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 OR2L2Q8NH16 312 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 DPF2Q92785 391 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 RIT2Q99578 217 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 SPATC1LQ9H0A9 340 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 SNX7Q9UNH6 387 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 PCDHA3Q9Y5H8 950 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 FKBP7Q9Y680 259 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 TPP1O14773 563 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 CMPK1P30085 196 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 C12orf66Q96MD2 445 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.4□□□□□ -0.42
SLX4-201ENST00000294008 FBXO9Q9UK97 447 aaPredicted RBP12.4□□□□□ -0.42
SLX4-201ENST00000294008 TNPO3Q9Y5L0 923 aaKnown RBP12.4□□□□□ -0.42
SLX4-201ENST00000294008 ABCA10Q8WWZ4 1543 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 PRAG1Q86YV5 1406 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 A0A1W2PQC6 194 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 BCAS1O75363 584 aaPredicted RBP12.4□□□□□ -0.42
SLX4-201ENST00000294008 CSTBP04080 98 aaKnown RBP12.4□□□□□ -0.42
SLX4-201ENST00000294008 SMAD3P84022 425 aaKnown RBP12.4□□□□□ -0.42
SLX4-201ENST00000294008 TMPRSS11AQ6ZMR5 421 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 TRPV1Q8NER1 839 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 NKX2-3Q8TAU0 364 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 KLRF1Q9NZS2 232 aa12.4□□□□□ -0.42
SLX4-201ENST00000294008 GNPDA1P46926 289 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 PCBP2Q15366 365 aaKnown RBP eCLIP12.39□□□□□ -0.43
SLX4-201ENST00000294008 ODF4Q2M2E3 257 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 SLC27A1Q6PCB7 646 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 TPCN2Q8NHX9 752 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 SENP8Q96LD8 212 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 OR52E6Q96RD3 313 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 ZSWIM1Q9BR11 485 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 POLMQ9NP87 494 aaPredicted RBP12.39□□□□□ -0.43
SLX4-201ENST00000294008 NYAP2Q9P242 653 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 ACTL7BQ9Y614 415 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 INAVAQ3KP66 663 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms