RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 SLC32A1Q9H598 525 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 LZTFL1Q9NQ48 299 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 UBP1Q9NZI7 540 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 FAM153AQ9UHL3 310 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 SLC17A4Q9Y2C5 497 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 IGF2RP11717 2491 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 MAP1BP46821 2468 aaKnown RBP9.13□□□□□ -0.95
HMGN1-201ENST00000288344 USP24Q9UPU5 2620 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 AGAP14A8MT82 685 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 GOLGA6L6A8MZA4 724 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 LMO7DNF2Z398 122 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 FANCGO15287 622 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 YY2O15391 372 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 SIGLEC6O43699 453 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 LIASO43766 372 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 NEBLO76041 1014 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 ITGAVP06756 1048 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 CELA2BP08218 269 aaPredicted RBP9.12□□□□□ -0.95
HMGN1-201ENST00000288344 TSHRP16473 764 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 ACP1P24666 158 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 VARSP26640 1264 aaKnown RBP9.12□□□□□ -0.95
HMGN1-201ENST00000288344 HMGCLP35914 325 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 CHRNA4P43681 627 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 ACADVLP49748 655 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 SIM1P81133 766 aaPredicted RBP9.12□□□□□ -0.95
HMGN1-201ENST00000288344 CDK3Q00526 305 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 MPP3Q13368 585 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 OLIG2Q13516 323 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 PTK2BQ14289 1009 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 GALNT3Q14435 633 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 ACOX1Q15067 660 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 RPS6KA1Q15418 735 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 SLC1A5Q15758 541 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 SMAD1Q15797 465 aaKnown RBP9.12□□□□□ -0.95
HMGN1-201ENST00000288344 CFAP58Q5T655 872 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 LYSMD3Q7Z3D4 306 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 PTAR1Q7Z6K3 402 aaPredicted RBP9.12□□□□□ -0.95
HMGN1-201ENST00000288344 CACTIN-AS1Q8N1I8 211 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 SDR16C5Q8N3Y7 309 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 RASGEF1CQ8N431 466 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 EID2Q8N6I1 236 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 GLIS1Q8NBF1 620 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 GPR26Q8NDV2 337 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 ZNF548Q8NEK5 533 aaPredicted RBP9.12□□□□□ -0.95
HMGN1-201ENST00000288344 LPCAT1Q8NF37 534 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 TRIM58Q8NG06 486 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 CCDC110Q8TBZ0 833 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 TSACCQ96A04 125 aaPredicted RBP9.12□□□□□ -0.95
HMGN1-201ENST00000288344 C19orf43Q9BQ61 176 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 ADGRE3Q9BY15 652 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 ZFYVE1Q9HBF4 777 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 NLGN3Q9NZ94 848 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 IL17CQ9P0M4 197 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 TTC7AQ9ULT0 858 aaPredicted RBP9.12□□□□□ -0.95
HMGN1-201ENST00000288344 DRG1Q9Y295 367 aaKnown RBP9.12□□□□□ -0.95
HMGN1-201ENST00000288344 NEU2Q9Y3R4 380 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 PCDHGA1Q9Y5H4 931 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 KMT2BQ9UMN6 2715 aaPredicted RBP9.12□□□□□ -0.95
HMGN1-201ENST00000288344 DSPP15924 2871 aaKnown RBP9.12□□□□□ -0.95
HMGN1-201ENST00000288344 LOC400499M0QZD8 3231 aa9.12□□□□□ -0.95
HMGN1-201ENST00000288344 H7C0C1 242 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 SDC3O75056 442 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 PMPCBO75439 489 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 AGTP01019 485 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 FTH1P19P0C7X4 201 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 PIRTP0C851 137 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 MYCLP1P12525 358 aaPredicted RBP9.11□□□□□ -0.95
HMGN1-201ENST00000288344 CKMT1AP12532 417 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 BPIP17213 487 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 STIP1P31948 543 aaKnown RBP9.11□□□□□ -0.95
HMGN1-201ENST00000288344 ATP5OP48047 213 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 DCDC1P59894 354 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 SRP54P61011 504 aaKnown RBP9.11□□□□□ -0.95
HMGN1-201ENST00000288344 DNAJC3Q13217 504 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 CCNG2Q16589 344 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 PARP6Q2NL67 630 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 ODF2Q5BJF6 829 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 DARS2Q6PI48 645 aaKnown RBP9.11□□□□□ -0.95
HMGN1-201ENST00000288344 LVRNQ6Q4G3 990 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 ENPP7Q6UWV6 458 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 TMPRSS7Q7RTY8 843 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 HEATR4Q86WZ0 1026 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 PHACTR4Q8IZ21 702 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 NDUFAF2Q8N183 169 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 PNPLA1Q8N8W4 532 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 OR56A4Q8NGH8 313 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 GPBAR1Q8TDU6 330 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 SETD7Q8WTS6 366 aaKnown RBP9.11□□□□□ -0.95
HMGN1-201ENST00000288344 ATG4AQ8WYN0 398 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 AP2M1Q96CW1 435 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 NUS1Q96E22 293 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 PDXPQ96GD0 296 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 WDR92Q96MX6 357 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 TMEM121Q9BTD3 319 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 RIOK2Q9BVS4 552 aaKnown RBP9.11□□□□□ -0.95
HMGN1-201ENST00000288344 FRMD8P1Q9BZ68 369 aaPredicted RBP9.11□□□□□ -0.95
HMGN1-201ENST00000288344 IL26Q9NPH9 171 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 MRPL40Q9NQ50 206 aaKnown RBP9.11□□□□□ -0.95
HMGN1-201ENST00000288344 KCND1Q9NSA2 647 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 DNAJC28Q9NX36 388 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms