RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 SOAT2O75908 522 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 EDNRBP24530 442 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 BRCC3P46736 316 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 RAD51Q06609 339 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 LRP8Q14114 963 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 PSMD5Q16401 504 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 FAM187BQ17R55 369 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 PPP4R4Q6NUP7 873 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 IL27RAQ6UWB1 636 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 GPR180Q86V85 440 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 GPR152Q8TDT2 470 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 MUS81Q96NY9 551 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 RIC8BQ9NVN3 520 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.35□□□□□ -0.277e-11■■■□□ 19.1
SCAF4-201ENST00000286835 ST14Q9Y5Y6 855 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 CLASP2O75122 1294 aaKnown RBP13.35□□□□□ -0.27
SCAF4-201ENST00000286835 LHX1P48742 406 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 TXNL4AP83876 142 aaKnown RBP13.35□□□□□ -0.27
SCAF4-201ENST00000286835 GALNT2Q10471 571 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 APOFQ13790 326 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 CRTC3Q6UUV7 619 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 OR10Q1Q8NGQ4 319 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 HPS1Q92902 700 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 CDK15Q96Q40 435 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 SMOQ99835 787 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 TMEM106CQ9BVX2 250 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 PNMA8BQ9ULN7 279 aaPredicted RBP13.35□□□□□ -0.27
SCAF4-201ENST00000286835 USP3Q9Y6I4 520 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 JAK1P23458 1154 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 DNAJB2P25686 324 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 CLCNKBP51801 687 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 TUBA4AP68366 448 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 TNK2Q07912 1038 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 LAPTM5Q13571 262 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 ACAP2Q15057 778 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 HMBOX1Q6NT76 420 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 DCLRE1AQ6PJP8 1040 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 BBS5Q8N3I7 341 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 SEMA3CQ99985 751 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 SLC2A4P14672 509 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 DARSP14868 501 aaKnown RBP13.34□□□□□ -0.27
SCAF4-201ENST00000286835 MAGEA10P43363 369 aaPredicted RBP13.34□□□□□ -0.27
SCAF4-201ENST00000286835 CLK1P49759 484 aaKnown RBP13.34□□□□□ -0.27
SCAF4-201ENST00000286835 TECRLQ5HYJ1 363 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 PAGE2BQ5JRK9 111 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 RETREG3Q86VR2 466 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 CARM1Q86X55 608 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 ABCG8Q9H221 673 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 PRDM16Q9HAZ2 1276 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 ZFP14Q9HCL3 533 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 FAM8A1Q9UBU6 413 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 FFAR3O14843 346 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 GPR42O15529 346 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 SLC22A3O75751 556 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 ZNF682O95780 498 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 CAPN3P20807 821 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 IMPDH1P20839 514 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 IGFBP6P24592 240 aaPredicted RBP13.34□□□□□ -0.27
SCAF4-201ENST00000286835 APLP1P51693 650 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 FOXA1P55317 472 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 ANGPTL8Q6UXH0 198 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 GALNT5Q7Z7M9 940 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 CIR1Q86X95 450 aaPredicted RBP13.34□□□□□ -0.27
SCAF4-201ENST00000286835 RBM12BQ8IXT5 1001 aaKnown RBP13.34□□□□□ -0.27
SCAF4-201ENST00000286835 TRPV3Q8NET8 790 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 KIF17Q9P2E2 1029 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 PCDHB7Q9Y5E2 793 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 MAGED1Q9Y5V3 778 aaPredicted RBP13.34□□□□□ -0.27
SCAF4-201ENST00000286835 PCNTO95613 3336 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 UTRNP46939 3433 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 H3BMQ9 156 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 PFDN6O15212 129 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 CST1P01037 141 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 SBK3P0C264 359 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 HOXA11P31270 313 aaPredicted RBP13.34□□□□□ -0.27
SCAF4-201ENST00000286835 CD52P31358 61 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 KPNA1P52294 538 aaPredicted RBP13.34□□□□□ -0.27
SCAF4-201ENST00000286835 TSNQ15631 228 aaKnown RBP13.34□□□□□ -0.27
SCAF4-201ENST00000286835 TSTD2Q5T7W7 516 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 CD99L2Q8TCZ2 262 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 TFAP2CQ92754 450 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 CASP10Q92851 521 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 ROPN1LQ96C74 230 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 COG8Q96MW5 612 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 ANKRD60Q9BZ19 345 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 CRTAC1Q9NQ79 661 aa13.34□□□□□ -0.27
SCAF4-201ENST00000286835 TRMT6Q9UJA5 497 aaKnown RBP13.34□□□□□ -0.27
SCAF4-201ENST00000286835 SCN1AP35498 2009 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 KPNA4O00629 521 aaPredicted RBP13.33□□□□□ -0.27
SCAF4-201ENST00000286835 ENPP3O14638 875 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 KPNA6O60684 536 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 DLGAP3O95886 979 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 OR4Q2P0C623 313 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 MTHFRP42898 656 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 IST1P53990 364 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 UFM1P61960 85 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 PRKCZQ05513 592 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 TGFBIQ15582 683 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 BNIPLQ7Z465 357 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 KIAA2013Q8IYS2 634 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms