RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 PSMG2Q969U7 264 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 FAM210AQ96ND0 272 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 SOX17Q9H6I2 414 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 SP110Q9HB58 689 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 SLC52A3Q9NQ40 469 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 FADS3Q9Y5Q0 445 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 GBF1Q92538 1859 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 A0A1W2PQH9 124 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 CLASP2O75122 1294 aaKnown RBP13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 BAIAP3O94812 1187 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 GLP2RO95838 553 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 POMCP01189 267 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 GPIP06744 558 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 HNRNPCP07910 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 RPL9P32969 192 aaKnown RBP13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 GRIK1P39086 918 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 FUT11Q495W5 492 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 GPR107Q5VW38 600 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 CROCCP3Q8IVE0 287 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 DCP1BQ8IZD4 617 aaKnown RBP13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 GOLM1Q8NBJ4 401 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 ALG2Q9H553 416 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 SEMA4BQ9NPR2 832 aaPredicted RBP13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 TDRKHQ9Y2W6 561 aaKnown RBP13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 ARL5AQ9Y689 179 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 SH3PXD2BA1X283 911 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 ASPDHA6ND91 283 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 H3BMQ9 156 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 ZNF701M0R085 212 aaPredicted RBP13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 CD3EAPO15446 510 aaKnown RBP13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 CNTN5O94779 1100 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 CTSHP09668 335 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 ATXN1LP0C7T5 689 aaKnown RBP13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 IDO1P14902 403 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 CES1P23141 567 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 EEF1DP29692 281 aaKnown RBP13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 RFC2P35250 354 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 LIPEQ05469 1076 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 CACNB2Q08289 660 aaPredicted RBP13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 RAB39AQ14964 217 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 ALFQ53S48 1182 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 ABRAXAS1Q6UWZ7 409 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 UMODL1-AS1Q8N2C9 162 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 PGBD5Q8N414 524 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 MAGEE2Q8TD90 523 aaPredicted RBP13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 BLOC1S5Q8TDH9 187 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 TEX37Q96LM6 180 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 COG8Q96MW5 612 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 ATOH8Q96SQ7 321 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 KCTD14Q9BQ13 255 aaPredicted RBP13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 POLR1BQ9H9Y6 1135 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 SMPD3Q9NY59 655 aaPredicted RBP13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 ZNHIT2Q9UHR6 403 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 TIMM22Q9Y584 194 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 GPR45Q9Y5Y3 372 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 V9GYQ6 96 aa13.19□□□□□ -0.3
SLC28A1-201ENST00000286749 TCRBV5S2A0A599 114 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 CCDC162PA2VCL2 907 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 WASH4PA8MWX3 477 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 SUPT3HB4E1H0 165 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 SUPT3HO75486 399 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 CAPGP40121 348 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 CASP2P42575 452 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 MRPS6P82932 125 aaKnown RBP13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 FOXM1Q08050 763 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 ANKDD1AQ495B1 522 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 CYBRD1Q53TN4 286 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 TMEM26Q6ZUK4 368 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 ZNF554Q86TJ5 538 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 DHRSXQ8N5I4 330 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 ARRDC2Q8TBH0 407 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 BRI3BPQ8WY22 251 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 MS4A4AQ96JQ5 239 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 SEZ6LQ9BYH1 1024 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 TRIM54Q9BYV2 358 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 RPF2Q9H7B2 306 aaKnown RBP13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 CD320Q9NPF0 282 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 CDH7Q9ULB5 785 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 USP22Q9UPT9 525 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 OAS3Q9Y6K5 1087 aaKnown RBP13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 TNFRSF10BO14763 440 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 CRCPO75575 148 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 SNAP29O95721 258 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 PIRTP0C851 137 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 PRSS56P0CW18 603 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 FCGR1AP12314 374 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 RPS9P46781 194 aaKnown RBP13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 YAP1P46937 504 aaKnown RBP13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 KCNK10P57789 538 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 CLCQ05315 142 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 FSCN1Q16658 493 aaKnown RBP13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 PAGE3Q5JUK9 113 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 OVOS1Q6IE37 1185 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 CHST15Q7LFX5 561 aaPredicted RBP13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 OR13C4Q8NGS5 318 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 TMEM74Q96NL1 305 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 NAA50Q9GZZ1 169 aaKnown RBP13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 FLRT1Q9NZU1 646 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 RNF181Q9P0P0 153 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms