RNA–Protein interactions for RNA: ENST00000284273.5

UBASH3B-201, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBASH3B, Length 6,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-201ENST00000284273 SNX20Q7Z614 316 aa11.84□□□□□ -0.51
UBASH3B-201ENST00000284273 GORASP1Q9BQQ3 440 aa11.84□□□□□ -0.51
UBASH3B-201ENST00000284273 CARS2Q9HA77 564 aaKnown RBP11.84□□□□□ -0.51
UBASH3B-201ENST00000284273 TIMM22Q9Y584 194 aa11.84□□□□□ -0.51
UBASH3B-201ENST00000284273 KCNE2Q9Y6J6 123 aa11.84□□□□□ -0.51
UBASH3B-201ENST00000284273 PXDNQ92626 1479 aa11.84□□□□□ -0.51
UBASH3B-201ENST00000284273 MTX2O75431 263 aa11.83□□□□□ -0.51
UBASH3B-201ENST00000284273 TBX18O95935 607 aa11.83□□□□□ -0.51
UBASH3B-201ENST00000284273 SLC6A2P23975 617 aa11.83□□□□□ -0.51
UBASH3B-201ENST00000284273 SULT2A1Q06520 285 aa11.83□□□□□ -0.51
UBASH3B-201ENST00000284273 TRAF3Q13114 568 aa11.83□□□□□ -0.51
UBASH3B-201ENST00000284273 HGSNATQ68CP4 663 aa11.83□□□□□ -0.51
UBASH3B-201ENST00000284273 RALGPS2Q86X27 583 aaPredicted RBP11.83□□□□□ -0.51
UBASH3B-201ENST00000284273 SLC22A15Q8IZD6 547 aa11.83□□□□□ -0.51
UBASH3B-201ENST00000284273 PYROXD2Q8N2H3 581 aa11.83□□□□□ -0.51
UBASH3B-201ENST00000284273 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 FAM155BO75949 473 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 CHRNGP07510 517 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 TYRP1P17643 537 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 TUSC3Q13454 348 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 TMEM119Q4V9L6 283 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 VARS2Q5ST30 1063 aaKnown RBP11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 LPCAT2Q7L5N7 544 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 LIX1Q8N485 282 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 SAMD3Q8N6K7 520 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 RORBQ92753 470 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 SLC38A2Q96QD8 506 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 GPR20Q99678 358 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 CLN6Q9NWW5 311 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 MEIS2O14770 477 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 AREL1O15033 823 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 PGM3O95394 542 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 TPP2P29144 1249 aaPredicted RBP11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 NR0B1P51843 470 aaKnown RBP11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 LYPLAL1Q5VWZ2 237 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 OR2AG1Q9H205 316 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 THAP1Q9NVV9 213 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 ACP5P13686 325 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 ADRA1DP25100 572 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 CDK18Q07002 472 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 KCTD21Q4G0X4 260 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 TMEM164Q5U3C3 297 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 SPESP1Q6UW49 350 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 C1orf186Q6ZWK4 172 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 CERS2Q96G23 380 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 APOLD1Q96LR9 279 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 AIF1LQ9BQI0 150 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 VIPAS39Q9H9C1 493 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 TNPO3Q9Y5L0 923 aaKnown RBP11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 A0A0U1RQJ8 604 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 SLC38A8A6NNN8 435 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 SLC28A1O00337 649 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 ALOX5P09917 674 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 TACR2P21452 398 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 ZNF143P52747 638 aaPredicted RBP11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 NKAPQ8N5F7 415 aaKnown RBP11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 APBB2Q92870 758 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 RBM18Q96H35 190 aaKnown RBP11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 ALG2Q9H553 416 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 RGS17Q9UGC6 210 aaPredicted RBP11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 PHF11Q9UIL8 331 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 CARNS1A5YM72 827 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 C2orf71A6NGG8 1288 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 SSNA1O43805 119 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 RPL14P50914 215 aaKnown RBP11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 FRG1Q14331 258 aaKnown RBP11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 ECM1Q16610 540 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 PLPPR4Q7Z2D5 763 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 NLGN4XQ8N0W4 816 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 CCDC54Q8NEL0 328 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 JOSD2Q8TAC2 188 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 C3orf18Q9UK00 162 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 CDH7Q9ULB5 785 aa11.83□□□□□ -0.52
UBASH3B-201ENST00000284273 ARHGEF33A8MVX0 844 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 TRBC1P01850 177 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 SLC25A3Q00325 362 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 PEX6Q13608 980 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 PITRM1Q5JRX3 1037 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 CMC1Q7Z7K0 106 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 CLVS1Q8IUQ0 354 aaPredicted RBP11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 RBFAQ8N0V3 343 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 TMEM161BQ8NDZ6 487 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.82□□□□□ -0.521e-8■■■■■ 27
UBASH3B-201ENST00000284273 CLEC4MQ9H2X3 399 aaPredicted RBP11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 EPS8L2Q9H6S3 715 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 RASSF1Q9NS23 344 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 MRTO4Q9UKD2 239 aaKnown RBP11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 LDB2O43679 373 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 PSMD10O75832 226 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 CST1P01037 141 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 LINGO3P0C6S8 592 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 JMJD7P0C870 316 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 PTENP60484 403 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 CAPN13Q6MZZ7 669 aaPredicted RBP11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 ANKRD46Q86W74 232 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 C10orf107Q8IVU9 208 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 SIDT2Q8NBJ9 832 aaKnown RBP11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 FAM13CQ8NE31 585 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 SPATA22Q8NHS9 363 aa11.82□□□□□ -0.52
UBASH3B-201ENST00000284273 ZNF75CPQ92670 426 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms