RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ARL1P40616 181 aaPredicted RBP17.88■□□□□ 0.45
CAPN1-201ENST00000279247 RCN1Q15293 331 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 DGKKQ5KSL6 1271 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 ICE2Q659A1 982 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 DEFB107AQ8IZN7 70 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 LRRC3Q9BY71 257 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 STN1Q9H668 368 aaKnown RBP17.88■□□□□ 0.45
CAPN1-201ENST00000279247 RNPEPL1Q9HAU8 725 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 STOML2Q9UJZ1 356 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 SLC30A1Q9Y6M5 507 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 NPEPPSL1A6NEC2 478 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 BTN3A1O00481 513 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 PLEKHG6Q3KR16 790 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 C9orf50Q5SZB4 431 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 C1orf146Q5VVC0 180 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 LILRA6Q6PI73 481 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 LCA5Q86VQ0 697 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 CLDN19Q8N6F1 224 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 STMN2Q93045 179 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 GIMAP2Q9UG22 337 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 RNF112Q9ULX5 631 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 COMMD10Q9Y6G5 202 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 CFLARO15519 480 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 SMIM24O75264 130 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 COX4I1P13073 169 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 OGNP20774 298 aaKnown RBP17.87■□□□□ 0.45
CAPN1-201ENST00000279247 HLA-FP30511 346 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 MSX2P35548 267 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-201ENST00000279247 ATXN3P54252 364 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-201ENST00000279247 INO80DQ53TQ3 878 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-201ENST00000279247 TCHHL1Q5QJ38 904 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-201ENST00000279247 ERLEC1Q96DZ1 483 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 SLC7A8Q9UHI5 535 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 SLCO3A1Q9UIG8 710 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 MED16Q9Y2X0 877 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 PTPRSQ13332 1948 aa17.87■□□□□ 0.45
CAPN1-201ENST00000279247 UBFD1O14562 309 aaKnown RBP17.86■□□□□ 0.45
CAPN1-201ENST00000279247 CYBBP04839 570 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 EPCAMP16422 314 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 CA5AP35218 305 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 NUDT2P50583 147 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 NME5P56597 212 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 SLC5A9Q2M3M2 681 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 MPPE1Q53F39 396 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 TSPAN33Q86UF1 283 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 LMNTD2Q8IXW0 634 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 CPNE9Q8IYJ1 553 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 ARHGAP24Q8N264 748 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 RNF148Q8N7C7 305 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 BOCQ9BWV1 1114 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 BBS2Q9BXC9 721 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 EMILIN2Q9BXX0 1053 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 ASB3Q9Y575 518 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 KIAA1671Q9BY89 1806 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 PLXNA4Q9HCM2 1894 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 LTBP2Q14767 1821 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 CCDC189A1A4V9 331 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 EIF4E1BA6NMX2 242 aaKnown RBP17.86■□□□□ 0.45
CAPN1-201ENST00000279247 VGLL3A8MV65 326 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 POM121L1PQ3SYA9 428 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 FAM91A1Q658Y4 838 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 TTC30BQ8N4P2 665 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 GPR150Q8NGU9 434 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 GRIN3AQ8TCU5 1115 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 TRPC4APQ8TEL6 797 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 SORCS1Q8WY21 1168 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 CMTM5Q96DZ9 223 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 KCNA7Q96RP8 456 aa17.86■□□□□ 0.45
CAPN1-201ENST00000279247 SEMA4BQ9NPR2 832 aaPredicted RBP17.86■□□□□ 0.45
CAPN1-201ENST00000279247 BAIAP3O94812 1187 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 PIK3R1P27986 724 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 SLC20A2Q08357 652 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 PPIGQ13427 754 aaKnown RBP eCLIP17.85■□□□□ 0.458e-7■■■□□ 16.7
CAPN1-201ENST00000279247 TYSND1Q2T9J0 566 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 EEF1AKMT1Q8WVE0 214 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 BIRC8Q96P09 236 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 ZDHHC6Q9H6R6 413 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 MID1IP1Q9NPA3 183 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 NOP53Q9NZM5 478 aaKnown RBP17.85■□□□□ 0.45
CAPN1-201ENST00000279247 KIAA1522Q9P206 1035 aaPredicted RBP17.85■□□□□ 0.45
CAPN1-201ENST00000279247 OBSL1O75147 1896 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 CIB2O75838 187 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 PGLSO95336 258 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 PRAMEF1O95521 474 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 AGTR2P50052 363 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 BTKQ06187 659 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 TBCCQ15814 346 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 RIPOR1Q6ZS17 1223 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 HTR3DQ70Z44 454 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 ZSWIM9Q86XI8 627 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 CNDP1Q96KN2 507 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 TRMT6Q9UJA5 497 aaKnown RBP17.85■□□□□ 0.45
CAPN1-201ENST00000279247 WNT6Q9Y6F9 365 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 ALPK3Q96L96 1907 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 NPHS1O60500 1241 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 RHOP08100 348 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 PKMP14618 531 aaKnown RBP17.85■□□□□ 0.45
CAPN1-201ENST00000279247 CPOXP36551 454 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 ECT2LQ008S8 904 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 SETMARQ53H47 684 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms