RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 RASSF1Q9NS23 344 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 KCND1Q9NSA2 647 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 TMEM51Q9NW97 253 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 OSER1Q9NX31 292 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 URADA6NGE7 173 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 QSOX1O00391 747 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 CLDN11O75508 207 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 PKMP14618 531 aaKnown RBP11.44□□□□□ -0.58
USP53-201ENST00000274030 RPL17P18621 184 aaKnown RBP11.44□□□□□ -0.58
USP53-201ENST00000274030 ICAM3P32942 547 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 NOGQ13253 232 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 MADCAM1Q13477 382 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 OR2T12Q8NG77 320 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 DQX1Q8TE96 717 aaKnown RBP11.44□□□□□ -0.58
USP53-201ENST00000274030 CLP1Q92989 425 aaKnown RBP11.44□□□□□ -0.58
USP53-201ENST00000274030 TCF12Q99081 682 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 LMAN2LQ9H0V9 348 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 SALL4Q9UJQ4 1053 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 PLLPQ9Y342 182 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 IQGAP1P46940 1657 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 RPP40O75818 363 aaKnown RBP11.44□□□□□ -0.58
USP53-201ENST00000274030 PDE9AO76083 593 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 SEMG2Q02383 582 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 PYDC2Q56P42 97 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 SLC44A1Q8WWI5 657 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 TLE6Q9H808 572 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 GALNT8Q9NY28 637 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 TMCC2O75069 709 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 SERPINB7O75635 380 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 LYPLA2O95372 231 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 TOP3BO95985 862 aaKnown RBP11.43□□□□□ -0.58
USP53-201ENST00000274030 PPM1AP35813 382 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 CPTPQ5TA50 214 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 CHADLQ6NUI6 762 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 C17orf64Q86WR6 236 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 AMER2Q8N7J2 671 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 XAGE5Q8WWM1 108 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 MYDGFQ969H8 173 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 AZIN2Q96A70 460 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 LPIN3Q9BQK8 851 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 TMEM138Q9NPI0 162 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 TSPAN1O60635 241 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 ADH1CP00326 375 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 PBX1P40424 430 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 TAS2R41P59536 307 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 CREMQ03060 361 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 BNIP2Q12982 314 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 TOP3AQ13472 1001 aaPredicted RBP11.43□□□□□ -0.58
USP53-201ENST00000274030 DCTN2Q13561 401 aaKnown RBP11.43□□□□□ -0.58
USP53-201ENST00000274030 GRM3Q14832 879 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 VPS26BQ4G0F5 336 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 ESAMQ96AP7 390 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 H3BM21 787 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 MAGP20916 626 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 CDKN2BP42772 138 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 PSMD8P48556 350 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 ATXN1P54253 815 aaKnown RBP11.43□□□□□ -0.58
USP53-201ENST00000274030 NAE1Q13564 534 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 ZNF662Q6ZS27 426 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 PTCHD4Q6ZW05 846 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 SLC24A5Q71RS6 500 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 MON1BQ7L1V2 547 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 TTLL2Q9BWV7 592 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 DEC1Q9P2X7 70 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 CLEC4AQ9UMR7 237 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 PREX1Q8TCU6 1659 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 RNASEH2AO75792 299 aaKnown RBP11.43□□□□□ -0.58
USP53-201ENST00000274030 IPO13O94829 963 aaKnown RBP11.43□□□□□ -0.58
USP53-201ENST00000274030 OR5F1O95221 314 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 EPHX1P07099 455 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 TACR2P21452 398 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 KLF10Q13118 480 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 ZNF460Q14592 562 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 NR1D2Q14995 579 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 C12orf56Q8IXR9 622 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 AADATQ8N5Z0 425 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 TEX47Q8TBZ9 253 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 TFAP2BQ92481 460 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 KAT2AQ92830 837 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 PCED1BQ96HM7 432 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 RPL10LQ96L21 214 aaKnown RBP11.43□□□□□ -0.58
USP53-201ENST00000274030 CIB1Q99828 191 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 TPK1Q9H3S4 243 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 AK5Q9Y6K8 562 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 PTPRJQ12913 1337 aa11.43□□□□□ -0.58
USP53-201ENST00000274030 KIDINS220Q9ULH0 1771 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 C9IYK1 514 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 G3V2T6 193 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 LIN7AO14910 233 aaPredicted RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 SNAP91O60641 907 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 LRIG2O94898 1065 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 EFNA1P20827 205 aaPredicted RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 LMO2P25791 158 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 RPL3P39023 403 aaKnown RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 HSPA7P48741 367 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 GJA9P57773 515 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 CHSY3Q70JA7 882 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 FAM47BQ8NA70 645 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 TP53INP1Q96A56 240 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 Q96MT0 163 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms