RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 OCIAD1Q9NX40 245 aa8.92□□□□□ -0.98
TPM3-201ENST00000271850 TMEM63CQ9P1W3 806 aa8.92□□□□□ -0.98
TPM3-201ENST00000271850 MOSPD1Q9UJG1 213 aa8.92□□□□□ -0.98
TPM3-201ENST00000271850 CNOT6Q9ULM6 557 aaKnown RBP8.92□□□□□ -0.98
TPM3-201ENST00000271850 MYO6Q9UM54 1294 aa8.92□□□□□ -0.98
TPM3-201ENST00000271850 TMEM98Q9Y2Y6 226 aa8.92□□□□□ -0.98
TPM3-201ENST00000271850 B3GALT1Q9Y5Z6 326 aa8.92□□□□□ -0.98
TPM3-201ENST00000271850 OAS3Q9Y6K5 1087 aaKnown RBP8.92□□□□□ -0.98
TPM3-201ENST00000271850 ZFC3H1O60293 1989 aaKnown RBP8.92□□□□□ -0.98
TPM3-201ENST00000271850 NBASA2RRP1 2371 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.91□□□□□ -0.98
TPM3-201ENST00000271850 DAPK3O43293 454 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 SUV39H1O43463 412 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 MFSD11O43934 449 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 MAP3K6O95382 1288 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 TPM2P07951 284 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 KELP23276 732 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 ALDH4A1P30038 563 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 LIMK2P53671 638 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 POLR2LP62875 67 aaKnown RBP8.91□□□□□ -0.98
TPM3-201ENST00000271850 TYRO3Q06418 890 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 DPTQ07507 201 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 SQSTM1Q13501 440 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 ARHGEF7Q14155 803 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 ZNF235Q14590 738 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 ASIC2Q16515 512 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 PYCR3Q53H96 274 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 MANEAQ5SRI9 462 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 LRRC66Q68CR7 880 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 RAET1GQ6H3X3 334 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 DOK6Q6PKX4 331 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 PRICKLE2Q7Z3G6 844 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 PIM3Q86V86 326 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 FAM71BQ8TC56 605 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 KIAA1524Q8TCG1 905 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 HSPH1Q92598 858 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 TMEM159Q96B96 161 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 COX14Q96I36 57 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 CMKLR1Q99788 373 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 GSDMCQ9BYG8 508 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 ZWILCHQ9H900 591 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 PHPT1Q9NRX4 125 aaPredicted RBP8.91□□□□□ -0.98
TPM3-201ENST00000271850 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.91□□□□□ -0.98
TPM3-201ENST00000271850 MYO1AQ9UBC5 1043 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 PHTF1Q9UMS5 762 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 PCDHGA3Q9Y5H0 932 aa8.91□□□□□ -0.98
TPM3-201ENST00000271850 A0A1B0GTH6 734 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 A6NCN8 305 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 PSMD11O00231 422 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 HGSO14964 777 aaPredicted RBP8.9□□□□□ -0.98
TPM3-201ENST00000271850 DNAJC6O75061 913 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 RNF8O76064 485 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 LIFP15018 202 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 UGT1A3P35503 534 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 ACTR1BP42025 376 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 MMP13P45452 471 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 RENBPP51606 427 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 STC1P52823 247 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 ACTR1AP61163 376 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 DSC2Q02487 901 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 NIPAL4Q0D2K0 466 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 ILF3Q12906 894 aaKnown RBP eCLIP8.9□□□□□ -0.98
TPM3-201ENST00000271850 ANO6Q4KMQ2 910 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 ATP13A4Q4VNC1 1196 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.9□□□□□ -0.98
TPM3-201ENST00000271850 NCBP2-AS2Q69YL0 99 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 ALG1LQ6GMV1 187 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 TMCO3Q6UWJ1 677 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 ADAMTSL4Q6UY14 1074 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 LZTR1Q8N653 840 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 OR4D9Q8NGE8 314 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 ARRDC2Q8TBH0 407 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 SLC37A2Q8TED4 501 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 MAML1Q92585 1016 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 EID2BQ96D98 161 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 SEMA3CQ99985 751 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 B3GNT4Q9C0J1 378 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 THAP2Q9H0W7 228 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 NT5MQ9NPB1 228 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 DONSONQ9NYP3 566 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 PDP2Q9P2J9 529 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 IL17BQ9UHF5 180 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 NENFQ9UMX5 172 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 PRKAB1Q9Y478 270 aa8.9□□□□□ -0.98
TPM3-201ENST00000271850 DOPEY2Q9Y3R5 2298 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 LRRK2Q5S007 2527 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 TRBV23OR9-2A0A075B6M9 112 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 A0A0J9YYE9 177 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 GOLGA6CA6NDK9 693 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 GOLGA6BA6NDN3 693 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 RHPN2P1A8MT19 583 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 FADS2P1A8MWK0 482 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 STMND1H3BQB6 276 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 H3BRJ5 948 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 ARHGAP6O43182 974 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 DUX1O43812 170 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 TRBC1P01850 177 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 HLA-DQB2P05538 268 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 MMP2P08253 660 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 GOLGA6DP0CG33 693 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms