RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 PLA2G4EQ3MJ16 856 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 PRSS55Q6UWB4 352 aaPredicted RBP13.24□□□□□ -0.29
SMG9-201ENST00000270066 ZBTB46Q86UZ6 589 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 TRABD2AQ86V40 505 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 TNS4Q8IZW8 715 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 OR14C36Q8NHC7 312 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 WFIKKN2Q8TEU8 576 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 SLC44A1Q8WWI5 657 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 AP2M1Q96CW1 435 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 HMCESQ96FZ2 354 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 PANX1Q96RD7 426 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 ZNF607Q96SK3 696 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 SDCBP2Q9H190 292 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 MRTO4Q9UKD2 239 aaKnown RBP13.24□□□□□ -0.29
SMG9-201ENST00000270066 TCAF1Q9Y4C2 921 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 KLRG2A4D1S0 409 aaPredicted RBP13.24□□□□□ -0.29
SMG9-201ENST00000270066 ERAL1O75616 437 aaKnown RBP13.24□□□□□ -0.29
SMG9-201ENST00000270066 VIPP01282 170 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 HOXB6P17509 224 aaKnown RBP13.24□□□□□ -0.29
SMG9-201ENST00000270066 TSPAN8P19075 237 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 GSSP48637 474 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 PPP2R2DQ66LE6 453 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 GPR135Q8IZ08 494 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 MOSPD2Q8NHP6 518 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 NUDT4Q9NZJ9 180 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 SPEF2Q9C093 1822 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 FAM163BP0C2L3 166 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 C4BPBP20851 252 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 CRHR1P34998 444 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 LAPTM5Q13571 262 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 CNKSR3Q6P9H4 555 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 ANKS1BQ7Z6G8 1248 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 C8orf59Q8N0T1 100 aaPredicted RBP13.24□□□□□ -0.29
SMG9-201ENST00000270066 LEMD2Q8NC56 503 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 SLC22A17Q8WUG5 538 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 ARNTL2Q8WYA1 636 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 ING5Q8WYH8 240 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 EXO5Q9H790 373 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 SEMA3GQ9NS98 782 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 PACSIN3Q9UKS6 424 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 COG5Q9UP83 839 aa13.24□□□□□ -0.29
SMG9-201ENST00000270066 PMM2O15305 246 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 ASLP04424 464 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 PCCBP05166 539 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 HNRNPLP14866 589 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMG9-201ENST00000270066 NDUFA9Q16795 377 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 DGKKQ5KSL6 1271 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 RNASEH2BQ5TBB1 312 aaKnown RBP13.23□□□□□ -0.29
SMG9-201ENST00000270066 CUZD1Q86UP6 607 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 OR4A15Q8NGL6 344 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 AARSD1Q9BTE6 412 aaKnown RBP13.23□□□□□ -0.29
SMG9-201ENST00000270066 CAB39LQ9H9S4 337 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 APOBEC3GQ9HC16 384 aaKnown RBP13.23□□□□□ -0.29
SMG9-201ENST00000270066 BBIP1A8MTZ0 92 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 RFXANKO14593 260 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 SLC25A12O75746 678 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 COL9A3Q14050 684 aaPredicted RBP13.23□□□□□ -0.29
SMG9-201ENST00000270066 FAM210AQ96ND0 272 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 TRAF6Q9Y4K3 522 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 NUP62P37198 522 aaPredicted RBP13.23□□□□□ -0.29
SMG9-201ENST00000270066 SSR2P43308 183 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 SLC25A3Q00325 362 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 ZNF618Q5T7W0 954 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 SCIMPQ6UWF3 145 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 LINGO4Q6UY18 593 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 KBTBD2Q8IY47 623 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 DNAJB14Q8TBM8 379 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 TFAP2BQ92481 460 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 TNKS2Q9H2K2 1166 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 CERS4Q9HA82 394 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 LRRC4CQ9HCJ2 640 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 GTPBP1O00178 669 aaKnown RBP13.23□□□□□ -0.29
SMG9-201ENST00000270066 AP3D1O14617 1153 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 TGDSO95455 350 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 HLA-DQA2P01906 255 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 BPGMP07738 259 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 PDK3Q15120 406 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 RNF220Q5VTB9 566 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.23□□□□□ -0.29
SMG9-201ENST00000270066 CMC1Q7Z7K0 106 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 Q96MT0 163 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 OR52E6Q96RD3 313 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 C1orf50Q9BV19 199 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 REXO4Q9GZR2 422 aaKnown RBP13.23□□□□□ -0.29
SMG9-201ENST00000270066 C6orf62Q9GZU0 229 aaPredicted RBP13.23□□□□□ -0.29
SMG9-201ENST00000270066 NEK6Q9HC98 313 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 POLR3HQ9Y535 204 aaPredicted RBP13.23□□□□□ -0.29
SMG9-201ENST00000270066 SLC22A3O75751 556 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 COL6A1P12109 1028 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 LMO2P25791 158 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 GRIA3P42263 894 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 WASP42768 502 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 GRSF1Q12849 480 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMG9-201ENST00000270066 RFTN1Q14699 578 aaPredicted RBP13.23□□□□□ -0.29
SMG9-201ENST00000270066 RBM44Q6ZP01 1051 aaKnown RBP13.23□□□□□ -0.29
SMG9-201ENST00000270066 KIAA0408Q6ZU52 694 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 HDDC2Q7Z4H3 204 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 OR7D4Q8NG98 312 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 SLC38A2Q96QD8 506 aa13.23□□□□□ -0.29
SMG9-201ENST00000270066 ERVK-5Q9HDB9 667 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms