RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 FGD3Q5JSP0 725 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 FOXR1Q6PIV2 292 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 ZNF366Q8N895 744 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 ITFG1Q8TB96 612 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 DNAJB14Q8TBM8 379 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 PTPN18Q99952 460 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 PHACTR1Q9C0D0 580 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 PACSIN3Q9UKS6 424 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 VIRMAQ69YN4 1812 aaKnown RBP13.67□□□□□ -0.22
NPC1-201ENST00000269228 FAM220BPB1ANY3 271 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 TMEM63AO94886 807 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 ASLP04424 464 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 SERPINB10P48595 397 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 UBAP2LQ14157 1087 aaKnown RBP13.67□□□□□ -0.22
NPC1-201ENST00000269228 RFTN1Q14699 578 aaPredicted RBP13.67□□□□□ -0.22
NPC1-201ENST00000269228 PDGFRLQ15198 375 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 SF1Q15637 639 aaKnown RBP13.67□□□□□ -0.22
NPC1-201ENST00000269228 KIAA0408Q6ZU52 694 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 ADCK1Q86TW2 530 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 PARGQ86W56 976 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 UTP15Q8TED0 518 aaKnown RBP13.67□□□□□ -0.22
NPC1-201ENST00000269228 CRYGNQ8WXF5 182 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 BADQ92934 168 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 BORCS6Q96GS4 357 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 FCRL5Q96RD9 977 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 KLHL4Q9C0H6 718 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 IPO13O94829 963 aaKnown RBP13.67□□□□□ -0.22
NPC1-201ENST00000269228 LDLRP01130 860 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 COL6A2P12110 1019 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 FBXO46Q6PJ61 603 aaPredicted RBP13.67□□□□□ -0.22
NPC1-201ENST00000269228 CELF5Q8N6W0 485 aaKnown RBP13.67□□□□□ -0.22
NPC1-201ENST00000269228 KLHL23Q8NBE8 558 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 CD101Q93033 1021 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 PAAF1Q9BRP4 392 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 BDH2Q9BUT1 245 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 SMG9Q9H0W8 520 aaKnown RBP13.67□□□□□ -0.22
NPC1-201ENST00000269228 POLR3BQ9NW08 1133 aaPredicted RBP13.67□□□□□ -0.22
NPC1-201ENST00000269228 MIOSQ9NXC5 875 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 FLRT1Q9NZU1 646 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 SORCS3Q9UPU3 1222 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 GRIN2DO15399 1336 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 NAV1Q8NEY1 1877 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 VIPP01282 170 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 ADH5P11766 374 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 COX4I1P13073 169 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 CYP4F2P78329 520 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 NAE1Q13564 534 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 PEX6Q13608 980 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 FSTL4Q6MZW2 842 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 ADGRD1Q6QNK2 874 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 IZUMO2Q6UXV1 221 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 SLC39A5Q6ZMH5 540 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 TMEM26Q6ZUK4 368 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 ZC3H3Q8IXZ2 948 aaKnown RBP13.67□□□□□ -0.22
NPC1-201ENST00000269228 CYB5D2Q8WUJ1 264 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 PROX1Q92786 737 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 AARSD1Q9BTE6 412 aaKnown RBP13.67□□□□□ -0.22
NPC1-201ENST00000269228 TRMT61BQ9BVS5 477 aaKnown RBP13.67□□□□□ -0.22
NPC1-201ENST00000269228 UGT2B28Q9BY64 529 aa13.67□□□□□ -0.22
NPC1-201ENST00000269228 LEF1Q9UJU2 399 aaPredicted RBP13.67□□□□□ -0.22
NPC1-201ENST00000269228 SNTNA6NMZ2 147 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 J3KR12 359 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 DEAF1O75398 565 aaPredicted RBP13.66□□□□□ -0.22
NPC1-201ENST00000269228 SMNDC1O75940 238 aaKnown RBP eCLIP13.66□□□□□ -0.22
NPC1-201ENST00000269228 IMPDH2P12268 514 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 TIE1P35590 1138 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 PRKG2Q13237 762 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 TMPRSS11BQ86T26 416 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 HDDC3Q8N4P3 179 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 CAMKK1Q8N5S9 505 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 AGAP2Q99490 1192 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 SMAD5Q99717 465 aaKnown RBP13.66□□□□□ -0.22
NPC1-201ENST00000269228 EIF2B3Q9NR50 452 aaKnown RBP13.66□□□□□ -0.22
NPC1-201ENST00000269228 DLGAP2Q9P1A6 1054 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 PSMD13Q9UNM6 376 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 ARL5AQ9Y689 179 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 MPSTP25325 297 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 MAGEA11P43364 429 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 TAF1AQ15573 450 aaPredicted RBP13.66□□□□□ -0.22
NPC1-201ENST00000269228 TRMT10BQ6PF06 316 aaKnown RBP13.66□□□□□ -0.22
NPC1-201ENST00000269228 CHMP1BQ7LBR1 199 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 TRMOQ9BU70 441 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 CDH19Q9H159 772 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 ABCG4Q9H172 646 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 DNAJC11Q9NVH1 559 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 GRHL1Q9NZI5 618 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 COPG2Q9UBF2 871 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 OR10H2O60403 315 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 STK16O75716 305 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 HCAR3P49019 387 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 SLC1A5Q15758 541 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 CYP1B1Q16678 543 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 DCAF12L1Q5VU92 463 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 GCNT7Q6ZNI0 430 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 STK32CQ86UX6 486 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 DCBLD1Q8N8Z6 715 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 ZFP28Q8NHY6 868 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 LMO3Q8TAP4 145 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 FBXO30Q8TB52 745 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 NPY6RQ99463 290 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms