RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 WDR70Q9NW82 654 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 FZD10Q9ULW2 581 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 PSAT1Q9Y617 370 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 NAV1Q8NEY1 1877 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 H0Y858 1186 aa11.52□□□□□ -0.56
VPS33A-201ENST00000267199 CD3EAPO15446 510 aaKnown RBP11.52□□□□□ -0.56
VPS33A-201ENST00000267199 HCRTO43612 131 aa11.52□□□□□ -0.56
VPS33A-201ENST00000267199 NOBOXO60393 691 aa11.52□□□□□ -0.56
VPS33A-201ENST00000267199 NBNO60934 754 aa11.52□□□□□ -0.56
VPS33A-201ENST00000267199 SORBS2O94875 1100 aaKnown RBP11.52□□□□□ -0.56
VPS33A-201ENST00000267199 LRATO95237 230 aa11.52□□□□□ -0.56
VPS33A-201ENST00000267199 ZNF7P17097 686 aaPredicted RBP11.52□□□□□ -0.56
VPS33A-201ENST00000267199 MAPK1P28482 360 aa11.52□□□□□ -0.56
VPS33A-201ENST00000267199 MED22Q15528 200 aa11.52□□□□□ -0.56
VPS33A-201ENST00000267199 CCNYL2Q5T2Q4 361 aa11.52□□□□□ -0.56
VPS33A-201ENST00000267199 STXBP5Q5T5C0 1151 aa11.52□□□□□ -0.56
VPS33A-201ENST00000267199 B3GNT9Q6UX72 402 aa11.52□□□□□ -0.56
VPS33A-201ENST00000267199 HDDC2Q7Z4H3 204 aa11.52□□□□□ -0.56
VPS33A-201ENST00000267199 HEXDCQ8WVB3 486 aa11.52□□□□□ -0.56
VPS33A-201ENST00000267199 TWIST2Q8WVJ9 160 aa11.52□□□□□ -0.56
VPS33A-201ENST00000267199 ESAMQ96AP7 390 aa11.52□□□□□ -0.56
VPS33A-201ENST00000267199 NODALQ96S42 347 aa11.52□□□□□ -0.56
VPS33A-201ENST00000267199 RBPJLQ9UBG7 517 aa11.52□□□□□ -0.56
VPS33A-201ENST00000267199 CACNA1SQ13698 1873 aa11.52□□□□□ -0.56
VPS33A-201ENST00000267199 FAM159BA6NKW6 160 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.52□□□□□ -0.57
VPS33A-201ENST00000267199 TP73O15350 636 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 TMCC2O75069 709 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 CYP7B1O75881 506 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 STAU1O95793 577 aaKnown RBP11.52□□□□□ -0.57
VPS33A-201ENST00000267199 ANGPTL1O95841 491 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 COL6A2P12110 1019 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 SLC7A1P30825 629 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 CAPGP40121 348 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 COPZ1P61923 177 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 ZBED5Q49AG3 693 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 GPRIN3Q6ZVF9 776 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 PCSK9Q8NBP7 692 aaKnown RBP11.52□□□□□ -0.57
VPS33A-201ENST00000267199 GPR152Q8TDT2 470 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 RNFT2Q96EX2 444 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 PCED1BQ96HM7 432 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 MAF1Q9H063 256 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 OPTCQ9UBM4 332 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 PMF1-BGLAPU3KQ54 211 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 TJP1Q07157 1748 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 N4BP2Q86UW6 1770 aaPredicted RBP11.52□□□□□ -0.57
VPS33A-201ENST00000267199 MYH4Q9Y623 1939 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 PHLPP1O60346 1717 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 H0YC42 278 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 NFKBIEO00221 500 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 RGS14O43566 566 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 ZNF182P17025 639 aaPredicted RBP11.52□□□□□ -0.57
VPS33A-201ENST00000267199 RPL9P32969 192 aaKnown RBP11.52□□□□□ -0.57
VPS33A-201ENST00000267199 DAOAP59103 153 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 ECT2LQ008S8 904 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 GALNT3Q14435 633 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 BRMS1LQ5PSV4 323 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 NCBP2-AS2Q69YL0 99 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 C16orf59Q7L2K0 433 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 LRRC49Q8IUZ0 686 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 CAMKK1Q8N5S9 505 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 SIGLEC10Q96LC7 697 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 SPRTNQ9H040 489 aaPredicted RBP11.52□□□□□ -0.57
VPS33A-201ENST00000267199 TBC1D30Q9Y2I9 924 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 POLR3HQ9Y535 204 aaPredicted RBP11.52□□□□□ -0.57
VPS33A-201ENST00000267199 DPYSL4O14531 572 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 CDH5P33151 784 aaPredicted RBP11.52□□□□□ -0.57
VPS33A-201ENST00000267199 SRP54P61011 504 aaKnown RBP11.52□□□□□ -0.57
VPS33A-201ENST00000267199 CDK18Q07002 472 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.52□□□□□ -0.57
VPS33A-201ENST00000267199 CCNIQ14094 377 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 AP5B1Q2VPB7 878 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 AHSA2Q719I0 299 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 DDX53Q86TM3 631 aaKnown RBP11.52□□□□□ -0.57
VPS33A-201ENST00000267199 PQLC3Q8N755 202 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 SELENOMQ8WWX9 145 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 RSPH1Q8WYR4 309 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 CENPIQ92674 756 aaPredicted RBP11.52□□□□□ -0.57
VPS33A-201ENST00000267199 FAM124BQ9H5Z6 455 aaPredicted RBP11.52□□□□□ -0.57
VPS33A-201ENST00000267199 BPIFA1Q9NP55 256 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 TMPRSS4Q9NRS4 437 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 SIRPGQ9P1W8 387 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 IGSF9Q9P2J2 1179 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 KANSL3Q9P2N6 904 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 ZDHHC2Q9UIJ5 367 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 MFHAS1Q9Y4C4 1052 aa11.52□□□□□ -0.57
VPS33A-201ENST00000267199 LOC110117498-PIK3R3F6TDL0 507 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 RFPL1O75677 317 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 ZNF132P52740 706 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 MAD2L1Q13257 205 aaPredicted RBP11.51□□□□□ -0.57
VPS33A-201ENST00000267199 PDCD4Q53EL6 469 aaKnown RBP11.51□□□□□ -0.57
VPS33A-201ENST00000267199 RPS27LQ71UM5 84 aaKnown RBP11.51□□□□□ -0.57
VPS33A-201ENST00000267199 TAC4Q86UU9 113 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 SMYD1Q8NB12 490 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 ST13P5Q8NFI4 369 aaPredicted RBP11.51□□□□□ -0.57
VPS33A-201ENST00000267199 KBTBD8Q8NFY9 601 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 ASB9Q96DX5 294 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 SLC47A1Q96FL8 570 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 DMRTB1Q96MA1 342 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 KLHL32Q96NJ5 620 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms