RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 KLF10Q13118 480 aa17.95■□□□□ 0.46
COL5A3-201ENST00000264828 GLYATQ6IB77 296 aa17.95■□□□□ 0.46
COL5A3-201ENST00000264828 ANKS1BQ7Z6G8 1248 aa17.95■□□□□ 0.46
COL5A3-201ENST00000264828 RIOX2Q8IUF8 465 aa17.95■□□□□ 0.46
COL5A3-201ENST00000264828 ASF1AQ9Y294 204 aa17.95■□□□□ 0.46
COL5A3-201ENST00000264828 TRBC1P01850 177 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 IGFBP5P24593 272 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 MRPS5P82675 430 aaKnown RBP17.94■□□□□ 0.46
COL5A3-201ENST00000264828 POU5F1Q01860 360 aaKnown RBP17.94■□□□□ 0.46
COL5A3-201ENST00000264828 SMCO1Q147U7 214 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 ITGB1BP2Q9UKP3 347 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 GNEQ9Y223 722 aaKnown RBP17.94■□□□□ 0.46
COL5A3-201ENST00000264828 ICAM3P32942 547 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 CDK18Q07002 472 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 FCHO2Q0JRZ9 810 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 PABPC1LQ4VXU2 614 aaKnown RBP17.94■□□□□ 0.46
COL5A3-201ENST00000264828 MPPE1Q53F39 396 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 OTOP3Q7RTS5 596 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 GPR65Q8IYL9 337 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 ART5Q96L15 291 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 CIDEBQ9UHD4 219 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 LSM1O15116 133 aaKnown RBP17.94■□□□□ 0.46
COL5A3-201ENST00000264828 POLR2JP52435 117 aaKnown RBP17.94■□□□□ 0.46
COL5A3-201ENST00000264828 DRG2P55039 364 aaKnown RBP17.94■□□□□ 0.46
COL5A3-201ENST00000264828 ZFP69Q49AA0 526 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 SERPINA13PQ6UXR4 307 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 TBC1D21Q8IYX1 336 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 ZNF221Q9UK13 617 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 DISP2A7MBM2 1401 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 NAA20P61599 178 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 FBXO48Q5FWF7 155 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 CPTPQ5TA50 214 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 RHBDF2Q6PJF5 856 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 IRF2BP2Q7Z5L9 587 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 OAFQ86UD1 273 aa17.94■□□□□ 0.46
COL5A3-201ENST00000264828 SAMD4AQ9UPU9 718 aaKnown RBP17.94■□□□□ 0.46
COL5A3-201ENST00000264828 C9JVG2 144 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 WNT3AP56704 352 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 CAMK1Q14012 370 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 SLC1A5Q15758 541 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 REP15Q6BDI9 236 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 FAM35AQ86V20 835 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 RBM15BQ8NDT2 890 aaKnown RBP17.93■□□□□ 0.46
COL5A3-201ENST00000264828 SHC3Q92529 594 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 TEFMQ96QE5 360 aaKnown RBP17.93■□□□□ 0.46
COL5A3-201ENST00000264828 MIR1-1HGQ9H1L0 117 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 BBIP1A8MTZ0 92 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 ECM1Q16610 540 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 VPS26BQ4G0F5 336 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 PPM1JQ5JR12 505 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 HECTD2Q5U5R9 776 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 IQSEC1Q6DN90 963 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 ZNF433Q8N7K0 673 aaPredicted RBP17.93■□□□□ 0.46
COL5A3-201ENST00000264828 ALG3Q92685 438 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 UROC1Q96N76 676 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 PLLPQ9Y342 182 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 TIMM22Q9Y584 194 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 PCDHB9Q9Y5E1 797 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 RICTORQ6R327 1708 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 PRODHO43272 600 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 NDUFS2O75306 463 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 SLC25A14O95258 325 aaPredicted RBP17.93■□□□□ 0.46
COL5A3-201ENST00000264828 FOSL2P15408 326 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 PDHA2P29803 388 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 MBTD1Q05BQ5 628 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 DGKZQ13574 1117 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 UGCGQ16739 394 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 ULK3Q6PHR2 472 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 ZNF563Q8TA94 476 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 HOPXQ9BPY8 73 aaPredicted RBP17.93■□□□□ 0.46
COL5A3-201ENST00000264828 CDADC1Q9BWV3 514 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 PCDH18Q9HCL0 1135 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 XIAPP98170 497 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 CLEC6AQ6EIG7 209 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 ZNF248Q8NDW4 579 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 OR2T34Q8NGX1 318 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 OR2T3Q8NH03 318 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 OR52J3Q8NH60 311 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 TRIM17Q9Y577 477 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 MSI1O43347 362 aaKnown RBP17.93■□□□□ 0.46
COL5A3-201ENST00000264828 MATKP42679 507 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 CEBPGP53567 150 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 MRPS6P82932 125 aaKnown RBP17.93■□□□□ 0.46
COL5A3-201ENST00000264828 SPATA19Q7Z5L4 167 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 SPOCK2Q92563 424 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 TTLL2Q9BWV7 592 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 NEK6Q9HC98 313 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 STOML2Q9UJZ1 356 aa17.93■□□□□ 0.46
COL5A3-201ENST00000264828 FPGTO14772 594 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 CRHR1P34998 444 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 SUZ12Q15022 739 aaKnown RBP17.92■□□□□ 0.46
COL5A3-201ENST00000264828 CXCL17Q6UXB2 119 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 ZNF730Q6ZMV8 503 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 NDRG1Q92597 394 aaKnown RBP17.92■□□□□ 0.46
COL5A3-201ENST00000264828 SKA1Q96BD8 255 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 IKZF4Q9H2S9 585 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 MARCH7Q9H992 704 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 MYOM1P52179 1685 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 URADA6NGE7 173 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 RNASEH2BQ5TBB1 312 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms