RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 SLC47A1Q96FL8 570 aa10.73□□□□□ -0.69
CD44-201ENST00000263398 TDRD1Q9BXT4 1180 aaKnown RBP10.73□□□□□ -0.69
CD44-201ENST00000263398 FZD8Q9H461 694 aa10.73□□□□□ -0.69
CD44-201ENST00000263398 RRAGCQ9HB90 399 aa10.73□□□□□ -0.69
CD44-201ENST00000263398 ZFYVE1Q9HBF4 777 aa10.73□□□□□ -0.69
CD44-201ENST00000263398 DIABLOQ9NR28 239 aa10.73□□□□□ -0.69
CD44-201ENST00000263398 PDE4DIPQ5VU43 2346 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 ADAMTS3O15072 1205 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 GPIP06744 558 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 WARSP23381 471 aaKnown RBP10.72□□□□□ -0.69
CD44-201ENST00000263398 OR1D2P34982 312 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 KIR3DL1P43629 444 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 CXCR3P49682 368 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 SLC5A3P53794 718 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 FAM110CQ1W6H9 321 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 ESRP1Q6NXG1 681 aaKnown RBP10.72□□□□□ -0.69
CD44-201ENST00000263398 CFAP52Q8N1V2 620 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 FSTL5Q8N475 847 aaPredicted RBP10.72□□□□□ -0.69
CD44-201ENST00000263398 CMASQ8NFW8 434 aaPredicted RBP10.72□□□□□ -0.69
CD44-201ENST00000263398 PSMA8Q8TAA3 256 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 HEXDCQ8WVB3 486 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 COL26A1Q96A83 441 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 MYO19Q96H55 970 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 LRTM1Q9HBL6 345 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 ZSCAN32Q9NX65 697 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 TMEM59LQ9UK28 342 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 NCKAP1Q9Y2A7 1128 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.72□□□□□ -0.69
CD44-201ENST00000263398 FAM47E-STBD1D6RA91 191 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 OR10H3O60404 316 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 STK16O75716 305 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 NADKO95544 446 aaPredicted RBP10.72□□□□□ -0.69
CD44-201ENST00000263398 NR2F6P10588 404 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 GPD2P43304 727 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 SLC18A1P54219 525 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 UGT2B15P54855 530 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 SPIBQ01892 262 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 DUSP4Q13115 394 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 ZNF846Q147U1 533 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 UBE2R2Q712K3 238 aaPredicted RBP10.72□□□□□ -0.69
CD44-201ENST00000263398 SAPCD2Q86UD0 394 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 RASAL3Q86YV0 1011 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 ATAD1Q8NBU5 361 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 GPR152Q8TDT2 470 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 GPR21Q99679 349 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 GORASP1Q9BQQ3 440 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 KCTD5Q9NXV2 234 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 FBXO10Q9UK96 956 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 CNTN6Q9UQ52 1028 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 TIMM22Q9Y584 194 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 RGPD5Q99666 1765 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 SETD1AO15047 1707 aaKnown RBP10.72□□□□□ -0.69
CD44-201ENST00000263398 DPPA5A6NC42 116 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 NPEPPSL1A6NEC2 478 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 PBX3P40426 434 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 THOP1P52888 689 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 ATP12AP54707 1039 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 DAOAP59103 153 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 COPZ1P61923 177 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 OLR1P78380 273 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 CREMQ03060 361 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 VPS26BQ4G0F5 336 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 TMEM63BQ5T3F8 832 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 TCAIMQ8N3R3 496 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 GIPC3Q8TF64 312 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 ASZ1Q8WWH4 475 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 TEFMQ96QE5 360 aaKnown RBP10.72□□□□□ -0.69
CD44-201ENST00000263398 ACBD6Q9BR61 282 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 TTPALQ9BTX7 342 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 RNF208Q9H0X6 261 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 SMPD3Q9NY59 655 aaPredicted RBP10.72□□□□□ -0.69
CD44-201ENST00000263398 ATXN10Q9UBB4 475 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 LMO7Q8WWI1 1683 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 EME2A4GXA9 379 aaPredicted RBP10.72□□□□□ -0.69
CD44-201ENST00000263398 C1QTNF3-AMACRE9PGA6 284 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 SLC25A14O95258 325 aaPredicted RBP10.72□□□□□ -0.69
CD44-201ENST00000263398 VNN1O95497 513 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 IDH3AP50213 366 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 TAS2R39P59534 338 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 FKBP1BP68106 108 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 CLCQ05315 142 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 DPYSL2Q16555 572 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 TSTD2Q5T7W7 516 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 ERICH5Q6P6B1 374 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 THAP5Q7Z6K1 395 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 CPNE8Q86YQ8 564 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 NAT8LQ8N9F0 302 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 ANKRD49Q8WVL7 239 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 C10orf82Q8WW14 230 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 APOLD1Q96LR9 279 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 CORO1BQ9BR76 489 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 ACSS2Q9NR19 701 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 POMPQ9Y244 141 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 U3KQV3 271 aa10.72□□□□□ -0.69
CD44-201ENST00000263398 SLC7A4O43246 635 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 NPHS1O60500 1241 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 DNAJA2O60884 412 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 C1RP00736 705 aa10.71□□□□□ -0.69
CD44-201ENST00000263398 NRG1Q02297 640 aaPredicted RBP10.71□□□□□ -0.69
CD44-201ENST00000263398 DSC2Q02487 901 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms