RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CDKN1CP49918 316 aaPredicted RBP27.39■■□□□ 1.98
SMARCD3-201ENST00000262188 TMEM52BQ4KMG9 183 aa27.39■■□□□ 1.98
SMARCD3-201ENST00000262188 LDB1Q86U70 411 aaPredicted RBP27.39■■□□□ 1.98
SMARCD3-201ENST00000262188 RAB7BQ96AH8 199 aa27.39■■□□□ 1.98
SMARCD3-201ENST00000262188 CERS2Q96G23 380 aa27.39■■□□□ 1.98
SMARCD3-201ENST00000262188 UGT1A7Q9HAW7 530 aa27.39■■□□□ 1.98
SMARCD3-201ENST00000262188 UGT1A10Q9HAW8 530 aa27.39■■□□□ 1.98
SMARCD3-201ENST00000262188 UGT1A8Q9HAW9 530 aa27.39■■□□□ 1.98
SMARCD3-201ENST00000262188 ITM2CQ9NQX7 267 aa27.39■■□□□ 1.98
SMARCD3-201ENST00000262188 SPATA6Q9NWH7 488 aaPredicted RBP27.39■■□□□ 1.98
SMARCD3-201ENST00000262188 MOCS1Q9NZB8 636 aa27.39■■□□□ 1.98
SMARCD3-201ENST00000262188 ZFR2Q9UPR6 939 aaKnown RBP27.39■■□□□ 1.98
SMARCD3-201ENST00000262188 IGLON5A6NGN9 336 aa27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 PLRG1O43660 514 aaKnown RBP27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 GOT2P00505 430 aaKnown RBP27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 SPINT3P49223 89 aa27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 ACVR1Q04771 509 aa27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 PEX6Q13608 980 aa27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 LONRF1Q17RB8 773 aa27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 KBTBD12Q3ZCT8 623 aa27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 KDM7AQ6ZMT4 941 aa27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 NLRP9Q7RTR0 991 aa27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 KCNMB4Q86W47 210 aa27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 RBM12BQ8IXT5 1001 aaKnown RBP27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 SPDYE1Q8NFV5 336 aaPredicted RBP27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 CXorf40AQ8TE69 158 aa27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 IL26Q9NPH9 171 aa27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 USP36Q9P275 1121 aaKnown RBP27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 MARCH4Q9P2E8 410 aaPredicted RBP27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 SCML1Q9UN30 329 aa27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 PLAAQ9Y263 795 aa27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 NCKAP1Q9Y2A7 1128 aa27.39■■□□□ 1.97
SMARCD3-201ENST00000262188 K7ESF4 209 aa27.38■■□□□ 1.97
SMARCD3-201ENST00000262188 GAPDHSO14556 408 aaPredicted RBP27.38■■□□□ 1.97
SMARCD3-201ENST00000262188 APBB3O95704 486 aa27.38■■□□□ 1.97
SMARCD3-201ENST00000262188 C7P10643 843 aa27.38■■□□□ 1.97
SMARCD3-201ENST00000262188 ZNF30P17039 623 aa27.38■■□□□ 1.97
SMARCD3-201ENST00000262188 MAT2AP31153 395 aaKnown RBP27.38■■□□□ 1.97
SMARCD3-201ENST00000262188 PPP2CBP62714 309 aa27.38■■□□□ 1.97
SMARCD3-201ENST00000262188 PPP2CAP67775 309 aa27.38■■□□□ 1.97
SMARCD3-201ENST00000262188 PRAMEP78395 509 aa27.38■■□□□ 1.97
SMARCD3-201ENST00000262188 KIAA0930Q6ICG6 404 aaPredicted RBP27.38■■□□□ 1.97
SMARCD3-201ENST00000262188 CCDC121Q6ZUS5 278 aa27.38■■□□□ 1.97
SMARCD3-201ENST00000262188 PELI3Q8N2H9 469 aa27.38■■□□□ 1.97
SMARCD3-201ENST00000262188 CBARPQ8N350 705 aaPredicted RBP27.38■■□□□ 1.97
SMARCD3-201ENST00000262188 TMEM105Q8N8V8 129 aa27.38■■□□□ 1.97
SMARCD3-201ENST00000262188 ZFAND2BQ8WV99 257 aa27.38■■□□□ 1.97
SMARCD3-201ENST00000262188 EPHX3Q9H6B9 360 aa27.38■■□□□ 1.97
SMARCD3-201ENST00000262188 IARS2Q9NSE4 1012 aaKnown RBP27.38■■□□□ 1.97
SMARCD3-201ENST00000262188 TBC1D3DA0A087WVF3 549 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 TBC1D3IA0A087WXS9 549 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 TBC1D3EA0A087X179 549 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 TBC1D3KA0A087X1G2 549 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 TBC1D3FA6NER0 549 aaPredicted RBP27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 TBC1D3LB9A6J9 549 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 ALDH1A2O94788 518 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 TBC1D3HP0C7X1 549 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 MC4RP32245 332 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 XIAPP98170 497 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 TBC1D3GQ6DHY5 549 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 TBC1D3CQ6IPX1 549 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 USP30Q70CQ3 517 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 TRIM74Q86UV6 250 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 TRIM73Q86UV7 250 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 TBC1D3Q8IZP1 549 aaPredicted RBP27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 SRPK1Q96SB4 655 aaKnown RBP27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 CENPHQ9H3R5 247 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 SMNDC1O75940 238 aaKnown RBP eCLIP27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 NFKBIAP25963 317 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 LACTB2Q53H82 288 aaPredicted RBP27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 RASSF3Q86WH2 238 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 COQ10AQ96MF6 247 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 ABCG8Q9H221 673 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 FZD4Q9ULV1 537 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 PSAT1Q9Y617 370 aa27.37■■□□□ 1.97
SMARCD3-201ENST00000262188 TRPM6Q9BX84 2022 aa27.36■■□□□ 1.97
SMARCD3-201ENST00000262188 AP1G1O43747 822 aa27.36■■□□□ 1.97
SMARCD3-201ENST00000262188 LZTS3O60299 673 aaPredicted RBP27.36■■□□□ 1.97
SMARCD3-201ENST00000262188 RECQL5O94762 991 aaPredicted RBP27.36■■□□□ 1.97
SMARCD3-201ENST00000262188 PHBP35232 272 aa27.36■■□□□ 1.97
SMARCD3-201ENST00000262188 SUOXP51687 545 aa27.36■■□□□ 1.97
SMARCD3-201ENST00000262188 PDE1BQ01064 536 aa27.36■■□□□ 1.97
SMARCD3-201ENST00000262188 RIPK1Q13546 671 aa27.36■■□□□ 1.97
SMARCD3-201ENST00000262188 LAMB3Q13751 1172 aa27.36■■□□□ 1.97
SMARCD3-201ENST00000262188 FGL2Q14314 439 aa27.36■■□□□ 1.97
SMARCD3-201ENST00000262188 SEMA3AQ14563 771 aa27.36■■□□□ 1.97
SMARCD3-201ENST00000262188 SLC30A9Q6PML9 568 aa27.36■■□□□ 1.97
SMARCD3-201ENST00000262188 TECPR1Q7Z6L1 1165 aa27.36■■□□□ 1.97
SMARCD3-201ENST00000262188 KBTBD6Q86V97 674 aa27.36■■□□□ 1.97
SMARCD3-201ENST00000262188 DENND6AQ8IWF6 608 aa27.36■■□□□ 1.97
SMARCD3-201ENST00000262188 A0A1W2PQU0 124 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 SMIM23A6NLE4 172 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 FAM155BO75949 473 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 UGT1A6P19224 532 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 UGT1A1P22309 533 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 UGT1A4P22310 534 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 UGT1A3P35503 534 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 UGT1A5P35504 534 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 ABCG1P45844 678 aa27.35■■□□□ 1.97
SMARCD3-201ENST00000262188 ROR2Q01974 943 aaKnown RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms