RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 COL4A3Q01955 1670 aa22.26■■□□□ 1.15
SIX3-201ENST00000260653 DLX3O60479 287 aa22.26■■□□□ 1.15
SIX3-201ENST00000260653 LEFTY1O75610 366 aa22.26■■□□□ 1.15
SIX3-201ENST00000260653 CA5AP35218 305 aa22.26■■□□□ 1.15
SIX3-201ENST00000260653 ABCE1P61221 599 aaKnown RBP22.26■■□□□ 1.15
SIX3-201ENST00000260653 GRM2Q14416 872 aa22.26■■□□□ 1.15
SIX3-201ENST00000260653 AARS2Q5JTZ9 985 aaKnown RBP22.26■■□□□ 1.15
SIX3-201ENST00000260653 MYADMQ96S97 322 aa22.26■■□□□ 1.15
SIX3-201ENST00000260653 GATA5Q9BWX5 397 aaPredicted RBP22.26■■□□□ 1.15
SIX3-201ENST00000260653 BRD9Q9H8M2 597 aa22.26■■□□□ 1.15
SIX3-201ENST00000260653 THG1LQ9NWX6 298 aaKnown RBP22.26■■□□□ 1.15
SIX3-201ENST00000260653 ELOVL2Q9NXB9 296 aa22.26■■□□□ 1.15
SIX3-201ENST00000260653 VPS9D1Q9Y2B5 631 aa22.26■■□□□ 1.15
SIX3-201ENST00000260653 DNAJC16Q9Y2G8 782 aa22.26■■□□□ 1.15
SIX3-201ENST00000260653 EYSQ5T1H1 3165 aa22.25■■□□□ 1.15
SIX3-201ENST00000260653 RHOBTB1O94844 696 aa22.25■■□□□ 1.15
SIX3-201ENST00000260653 UBOX5O94941 541 aa22.25■■□□□ 1.15
SIX3-201ENST00000260653 ASLP04424 464 aa22.25■■□□□ 1.15
SIX3-201ENST00000260653 CTSLP07711 333 aa22.25■■□□□ 1.15
SIX3-201ENST00000260653 SRPRAP08240 638 aaKnown RBP22.25■■□□□ 1.15
SIX3-201ENST00000260653 ZNF37AP17032 561 aaPredicted RBP22.25■■□□□ 1.15
SIX3-201ENST00000260653 ARFIP2P53365 341 aa22.25■■□□□ 1.15
SIX3-201ENST00000260653 PDAP1Q13442 181 aaKnown RBP22.25■■□□□ 1.15
SIX3-201ENST00000260653 CTSL3PQ5NE16 218 aa22.25■■□□□ 1.15
SIX3-201ENST00000260653 LIPMQ5VYY2 423 aa22.25■■□□□ 1.15
SIX3-201ENST00000260653 KLC3Q6P597 504 aa22.25■■□□□ 1.15
SIX3-201ENST00000260653 CCDC91Q7Z6B0 441 aa22.25■■□□□ 1.15
SIX3-201ENST00000260653 SFTPA1Q8IWL2 248 aa22.25■■□□□ 1.15
SIX3-201ENST00000260653 CCDC97Q96F63 343 aaPredicted RBP22.25■■□□□ 1.15
SIX3-201ENST00000260653 PLA2G2FQ9BZM2 168 aa22.25■■□□□ 1.15
SIX3-201ENST00000260653 CLEC1BQ9P126 229 aa22.25■■□□□ 1.15
SIX3-201ENST00000260653 DEC1Q9P2X7 70 aa22.25■■□□□ 1.15
SIX3-201ENST00000260653 SLC8A2Q9UPR5 921 aa22.25■■□□□ 1.15
SIX3-201ENST00000260653 DLX2Q07687 328 aaPredicted RBP22.25■■□□□ 1.15
SIX3-201ENST00000260653 PDGFRLQ15198 375 aa22.25■■□□□ 1.15
SIX3-201ENST00000260653 SETMARQ53H47 684 aaPredicted RBP22.25■■□□□ 1.15
SIX3-201ENST00000260653 SREK1Q8WXA9 508 aaKnown RBP22.25■■□□□ 1.15
SIX3-201ENST00000260653 BRWD1Q9NSI6 2320 aa22.25■■□□□ 1.15
SIX3-201ENST00000260653 TNRC18O15417 2968 aaPredicted RBP22.24■■□□□ 1.15
SIX3-201ENST00000260653 NEMP2A6NFY4 417 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 GOLGA8CPA6NN73 597 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 PFDN6O15212 129 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 SLC26A3P40879 764 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 ARSIQ5FYB1 569 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 GRAMD4Q6IC98 578 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 TXNDC5Q8NBS9 432 aaKnown RBP22.24■■□□□ 1.15
SIX3-201ENST00000260653 POPDC3Q9HBV1 291 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 TAS2R13Q9NYV9 303 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 GALPQ9UBC7 116 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 B4GALT6Q9UBX8 382 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 TFEBP19484 476 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 CORO7P57737 925 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 FCHO2Q0JRZ9 810 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 ADAM15Q13444 863 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 NFATC2Q13469 925 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 ACAP2Q15057 778 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 LACTB2Q53H82 288 aaPredicted RBP22.24■■□□□ 1.15
SIX3-201ENST00000260653 ERP27Q96DN0 273 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 KXD1Q9BQD3 176 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 ALG9Q9H6U8 611 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 ASB8Q9H765 288 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 GTSE1Q9NYZ3 720 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 NUMBLQ9Y6R0 609 aa22.24■■□□□ 1.15
SIX3-201ENST00000260653 GLYATL1P3A0A0U1RQE8 302 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 ZBTB14O43829 449 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 NIPSNAP2O75323 286 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 PKMP14618 531 aaKnown RBP22.23■■□□□ 1.15
SIX3-201ENST00000260653 VASPP50552 380 aaPredicted RBP22.23■■□□□ 1.15
SIX3-201ENST00000260653 ST8SIA6P61647 398 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 PTSQ03393 145 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 HSF5Q4G112 596 aaPredicted RBP22.23■■□□□ 1.15
SIX3-201ENST00000260653 ATAT1Q5SQI0 421 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 GPR26Q8NDV2 337 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 PIWIL2Q8TC59 973 aaKnown RBP22.23■■□□□ 1.15
SIX3-201ENST00000260653 PPP4R1Q8TF05 950 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 LRRC37BQ96QE4 947 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 GPR21Q99679 349 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 C19orf43Q9BQ61 176 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 MYLK2Q9H1R3 596 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 IL36AQ9UHA7 158 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 APPL1Q9UKG1 709 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 PLA2G4CQ9UP65 541 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 TCF20Q9UGU0 1960 aaKnown RBP22.23■■□□□ 1.15
SIX3-201ENST00000260653 UGT1A6P19224 532 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 UGT1A1P22309 533 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 UGT1A4P22310 534 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 UGT1A3P35503 534 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 UGT1A5P35504 534 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 SPAM1P38567 509 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 PTGER3P43115 390 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 NAGLUP54802 743 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 POM121L1PQ3SYA9 428 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 BRAT1Q6PJG6 821 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 PAQR3Q6TCH7 311 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 RFLNAQ6ZTI6 216 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 SNX20Q7Z614 316 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 SERPINA9Q86WD7 417 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 NAT14Q8WUY8 206 aa22.23■■□□□ 1.15
SIX3-201ENST00000260653 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.23■■□□□ 1.15
SIX3-201ENST00000260653 PTERQ96BW5 349 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms