RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 ZNF473Q8WTR7 871 aaKnown RBP17.42■□□□□ 0.38
SRSF1-201ENST00000258962 FRS2Q8WU20 508 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 SPOCK2Q92563 424 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 CDKN2AIPNLQ96HQ2 116 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 TUBGCP5Q96RT8 1024 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 CPEB1Q9BZB8 566 aaKnown RBP17.42■□□□□ 0.38
SRSF1-201ENST00000258962 HACD3Q9P035 362 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 EBF1Q9UH73 591 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 STON1Q9Y6Q2 735 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 A0A0J9YYE9 177 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 C2orf81A6NN90 581 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 TCP11X1B4DZS4 312 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 BNIP3LO60238 219 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 LILRB5O75023 590 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 TRBC1P01850 177 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 SLC4A1P02730 911 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 TAC1P20366 129 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 LPOP22079 712 aaPredicted RBP17.42■□□□□ 0.38
SRSF1-201ENST00000258962 HADHAP40939 763 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 LEPRP48357 1165 aaKnown RBP17.42■□□□□ 0.38
SRSF1-201ENST00000258962 SEMA3AQ14563 771 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 STARD3Q14849 445 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 PDK4Q16654 411 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 PTPRNQ16849 979 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 CNSTQ6PJW8 725 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 SERPINA13PQ6UXR4 307 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 LDB1Q86U70 411 aaPredicted RBP17.42■□□□□ 0.38
SRSF1-201ENST00000258962 SLC41A1Q8IVJ1 513 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 LMNTD2Q8IXW0 634 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 PGBD3Q8N328 593 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 CHST14Q8NCH0 376 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 OR2A12Q8NGT7 310 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 GPR150Q8NGU9 434 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 EID2BQ96D98 161 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 ECHDC3Q96DC8 303 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 GABRG3Q99928 467 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 FAM107BQ9H098 131 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 NSRP1Q9H0G5 558 aaKnown RBP17.42■□□□□ 0.38
SRSF1-201ENST00000258962 MAGEE1Q9HCI5 957 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 EMCNQ9ULC0 261 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 SLC39A10Q9ULF5 831 aa17.42■□□□□ 0.38
SRSF1-201ENST00000258962 FAM95CA0A1B0GW59 222 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 TCRBV21S2A2A0A5A6 115 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 ERICH4A6NGS2 130 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 TTC34A8MYJ7 566 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 WASH3PC4AMC7 463 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 SYNCRIPO60506 623 aaKnown RBP17.41■□□□□ 0.38
SRSF1-201ENST00000258962 GLRA3O75311 464 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 S1PR4O95977 384 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 LMNAP02545 664 aaKnown RBP17.41■□□□□ 0.38
SRSF1-201ENST00000258962 DLDP09622 509 aaKnown RBP17.41■□□□□ 0.38
SRSF1-201ENST00000258962 CCT5P48643 541 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 VASPP50552 380 aaPredicted RBP17.41■□□□□ 0.38
SRSF1-201ENST00000258962 PGGT1BP53609 377 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 ZNF234Q14588 700 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 SEPT7Q16181 437 aaKnown RBP17.41■□□□□ 0.38
SRSF1-201ENST00000258962 FNDC3BQ53EP0 1204 aaKnown RBP17.41■□□□□ 0.38
SRSF1-201ENST00000258962 RGS9BPQ6ZS82 235 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 LYSMD3Q7Z3D4 306 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 PLPP6Q8IY26 295 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 OTUD6BQ8N6M0 293 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 OR4L1Q8NH43 312 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 GABPB2Q8TAK5 448 aaPredicted RBP17.41■□□□□ 0.38
SRSF1-201ENST00000258962 HMGB4Q8WW32 186 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 IQCGQ9H095 443 aaKnown RBP17.41■□□□□ 0.38
SRSF1-201ENST00000258962 VPS11Q9H270 941 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 ZDHHC6Q9H6R6 413 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 RAB23Q9ULC3 237 aa17.41■□□□□ 0.38
SRSF1-201ENST00000258962 A0A096LPK6 155 aa17.4■□□□□ 0.38
SRSF1-201ENST00000258962 CD3EAPO15446 510 aaKnown RBP17.4■□□□□ 0.38
SRSF1-201ENST00000258962 POP4O95707 220 aaKnown RBP17.4■□□□□ 0.38
SRSF1-201ENST00000258962 ASLP04424 464 aa17.4■□□□□ 0.38
SRSF1-201ENST00000258962 MPOP05164 745 aa17.4■□□□□ 0.38
SRSF1-201ENST00000258962 C2P06681 752 aa17.4■□□□□ 0.38
SRSF1-201ENST00000258962 SRPRAP08240 638 aaKnown RBP17.4■□□□□ 0.38
SRSF1-201ENST00000258962 VIMP08670 466 aaKnown RBP17.4■□□□□ 0.38
SRSF1-201ENST00000258962 PRSS56P0CW18 603 aa17.4■□□□□ 0.38
SRSF1-201ENST00000258962 ST8SIA6P61647 398 aa17.4■□□□□ 0.38
SRSF1-201ENST00000258962 IRF9Q00978 393 aa17.4■□□□□ 0.38
SRSF1-201ENST00000258962 CDKN3Q16667 212 aa17.4■□□□□ 0.38
SRSF1-201ENST00000258962 USP39Q53GS9 565 aaKnown RBP17.4■□□□□ 0.38
SRSF1-201ENST00000258962 RBM20Q5T481 1227 aaKnown RBP17.4■□□□□ 0.38
SRSF1-201ENST00000258962 C16orf46Q6P387 395 aa17.4■□□□□ 0.38
SRSF1-201ENST00000258962 AFTPHQ6ULP2 937 aa17.4■□□□□ 0.38
SRSF1-201ENST00000258962 CEP68Q76N32 757 aa17.4■□□□□ 0.38
SRSF1-201ENST00000258962 CLEC14AQ86T13 490 aa17.4■□□□□ 0.38
SRSF1-201ENST00000258962 PLD6Q8N2A8 252 aaKnown RBP17.4■□□□□ 0.38
SRSF1-201ENST00000258962 SUV39H2Q9H5I1 410 aa17.4■□□□□ 0.38
SRSF1-201ENST00000258962 CATSPERZQ9NTU4 200 aa17.4■□□□□ 0.38
SRSF1-201ENST00000258962 IL17CQ9P0M4 197 aa17.4■□□□□ 0.38
SRSF1-201ENST00000258962 FKBPLQ9UIM3 349 aa17.4■□□□□ 0.38
SRSF1-201ENST00000258962 A0A1W2PQF6 199 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 WDR91A4D1P6 747 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 CAPN8A6NHC0 703 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 EBAG9O00559 213 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 HRO43593 1189 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 EPHX1P07099 455 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 OGNP20774 298 aaKnown RBP17.39■□□□□ 0.37
SRSF1-201ENST00000258962 IL12RB1P42701 662 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 SERPINB4P48594 390 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms