RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 PPP4R4Q6NUP7 873 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 C8orf82Q6P1X6 216 aaPredicted RBP16.95■□□□□ 0.3
FOXA1-201ENST00000250448 DHRS4L2Q6PKH6 230 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 HACD2Q6Y1H2 254 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 DHFR2Q86XF0 187 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 FAM47BQ8NA70 645 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 C2CD4AQ8NCU7 369 aaPredicted RBP16.95■□□□□ 0.3
FOXA1-201ENST00000250448 PLEKHG4BQ96PX9 1271 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 MPP6Q9NZW5 540 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 TCAF1Q9Y4C2 921 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 A8MT66 165 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 SOCS2O14508 198 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 NRP2O60462 931 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 MT-CYBP00156 380 aaPredicted RBP16.94■□□□□ 0.3
FOXA1-201ENST00000250448 KCNA5P22460 613 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 KLHL35Q6PF15 583 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 RPS27LQ71UM5 84 aaKnown RBP16.94■□□□□ 0.3
FOXA1-201ENST00000250448 SPRED2Q7Z698 418 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 TCF12Q99081 682 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 NDFIP2Q9NV92 336 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.94■□□□□ 0.3
FOXA1-201ENST00000250448 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.94■□□□□ 0.3
FOXA1-201ENST00000250448 LCHNA4D1U4 455 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 FGBP02675 491 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 ATP6V1B2P21281 511 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 POU4F1Q01851 419 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 PRKCQQ04759 706 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 KCTD21Q4G0X4 260 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 ERMP1Q7Z2K6 904 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 RBM12BQ8IXT5 1001 aaKnown RBP16.94■□□□□ 0.3
FOXA1-201ENST00000250448 OR2T34Q8NGX1 318 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 OR2T3Q8NH03 318 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 CCDC126Q96EE4 140 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 RANBP9Q96S59 729 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 MRM3Q9HC36 420 aaKnown RBP16.94■□□□□ 0.3
FOXA1-201ENST00000250448 ARHGEF38Q9NXL2 777 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 IL37Q9NZH6 218 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 PRKAG2Q9UGJ0 569 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 SUN2Q9UH99 717 aa16.94■□□□□ 0.3
FOXA1-201ENST00000250448 FAF1Q9UNN5 650 aaPredicted RBP16.94■□□□□ 0.3
FOXA1-201ENST00000250448 PLXNA3P51805 1871 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 COL4A4P53420 1690 aaPredicted RBP16.93■□□□□ 0.3
FOXA1-201ENST00000250448 AKAP10O43572 662 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 IPO13O94829 963 aaKnown RBP16.93■□□□□ 0.3
FOXA1-201ENST00000250448 IMPDH2P12268 514 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 BMP2P12643 396 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 LAG3P18627 525 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 MAGEA10P43363 369 aaPredicted RBP16.93■□□□□ 0.3
FOXA1-201ENST00000250448 ZNF135P52742 658 aaPredicted RBP16.93■□□□□ 0.3
FOXA1-201ENST00000250448 DENND5AQ6IQ26 1287 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 CMTR2Q8IYT2 770 aaKnown RBP16.93■□□□□ 0.3
FOXA1-201ENST00000250448 OR9I1Q8NGQ6 314 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 FNDC8Q8TC99 324 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 TFAP2CQ92754 450 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 TRIM62Q9BVG3 475 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 TLR8Q9NR97 1041 aaKnown RBP16.93■□□□□ 0.3
FOXA1-201ENST00000250448 GMPR2Q9P2T1 348 aaKnown RBP16.93■□□□□ 0.3
FOXA1-201ENST00000250448 FBXO5Q9UKT4 447 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 BACE2Q9Y5Z0 518 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 HS3ST4Q9Y661 456 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 ALPK3Q96L96 1907 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 URODP06132 367 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 TBX4P57082 545 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 PRAMEP78395 509 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 FAM83EQ2M2I3 478 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 MAP7D1Q3KQU3 841 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 RBM20Q5T481 1227 aaKnown RBP16.93■□□□□ 0.3
FOXA1-201ENST00000250448 ARHGAP36Q6ZRI8 547 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 GPR141Q7Z602 305 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 SPNS2Q8IVW8 549 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 ZNF461Q8TAF7 563 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 FAM110BQ8TC76 370 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 CANT1Q8WVQ1 401 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 HSPBAP1Q96EW2 488 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 SERPINB11Q96P15 392 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 ARMC1Q9NVT9 282 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 MARCH2Q9P0N8 246 aa16.93■□□□□ 0.3
FOXA1-201ENST00000250448 SLC12A8A0AV02 714 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 SAC3D1A6NKF1 404 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 ZSCAN9O15535 394 aaPredicted RBP16.92■□□□□ 0.3
FOXA1-201ENST00000250448 ANXA9O76027 345 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 GRIA3P42263 894 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 NUP107P57740 925 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 PIK3R6Q5UE93 754 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 BEND5Q7L4P6 421 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 RNF135Q8IUD6 432 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 PTCD2Q8WV60 388 aaKnown RBP16.92■□□□□ 0.3
FOXA1-201ENST00000250448 PPP1R14BQ96C90 147 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 SPATA17Q96L03 361 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 FCRL5Q96RD9 977 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 SLC39A3Q9BRY0 314 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 VPS45Q9NRW7 570 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 TUBA8Q9NY65 449 aaPredicted RBP16.92■□□□□ 0.3
FOXA1-201ENST00000250448 NEU3Q9UQ49 428 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 A0A087WXM4 84 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 FAM92AA1XBS5 289 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 DFFAO00273 331 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 AURKAO14965 403 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 MAGEB3O15480 346 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 TLR5O60602 858 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms