RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 PLEKHG4BQ96PX9 1271 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 GORASP1Q9BQQ3 440 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 ZSCAN5AQ9BUG6 496 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 RIOK2Q9BVS4 552 aaKnown RBP12.71□□□□□ -0.37
VPREB3-201ENST00000248948 FAM83DQ9H4H8 585 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 CYP4F12Q9HCS2 524 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 TRNAU1APQ9NX07 287 aaKnown RBP12.71□□□□□ -0.37
VPREB3-201ENST00000248948 BPTFQ12830 3046 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 RP1P56715 2156 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 EME2A4GXA9 379 aaPredicted RBP12.7□□□□□ -0.38
VPREB3-201ENST00000248948 C5orf60A6NFR6 353 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 YY2O15391 372 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 CELA2BP08218 269 aaPredicted RBP12.7□□□□□ -0.38
VPREB3-201ENST00000248948 PSMB4P28070 264 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 HMGCLP35914 325 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 ILF3Q12906 894 aaKnown RBP eCLIP12.7□□□□□ -0.38
VPREB3-201ENST00000248948 C1orf61Q13536 156 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 PEX6Q13608 980 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 LRP8Q14114 963 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 PRPSAP1Q14558 356 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 RPS6KA1Q15418 735 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 P3H1Q32P28 736 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 CCDC157Q569K6 752 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 SIRPB2Q5JXA9 342 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 HES3Q5TGS1 186 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 ZDHHC20Q5W0Z9 365 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 NYAP1Q6ZVC0 841 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 RD3Q7Z3Z2 195 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 KDELC2Q7Z4H8 507 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 SLC35F3Q8IY50 421 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 TRAM1L1Q8N609 369 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 CNTNAP3BQ96NU0 1288 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 WDR24Q96S15 920 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 FAM118BQ9BPY3 351 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 GSDMCQ9BYG8 508 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 CNTNAP3Q9BZ76 1288 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 GPR63Q9BZJ6 419 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 CARS2Q9HA77 564 aaKnown RBP12.7□□□□□ -0.38
VPREB3-201ENST00000248948 MRPL40Q9NQ50 206 aaKnown RBP12.7□□□□□ -0.38
VPREB3-201ENST00000248948 PPP2R2CQ9Y2T4 447 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 SPO11Q9Y5K1 396 aa12.7□□□□□ -0.38
VPREB3-201ENST00000248948 KMT2BQ9UMN6 2715 aaPredicted RBP12.69□□□□□ -0.38
VPREB3-201ENST00000248948 ASXL3Q9C0F0 2248 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 FADS2P1A8MWK0 482 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 GPR89AB7ZAQ6 455 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 PPFIA2O75334 1257 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 SLC4A1P02730 911 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 PIRTP0C851 137 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 GPR89BP0CG08 455 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 CHRNA4P43681 627 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 INSM1Q01101 510 aaPredicted RBP12.69□□□□□ -0.38
VPREB3-201ENST00000248948 FAM182AQ5T1J6 154 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 GUSBP11Q6P575 273 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 GLT6D1Q7Z4J2 308 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 SLC13A5Q86YT5 568 aaPredicted RBP12.69□□□□□ -0.38
VPREB3-201ENST00000248948 PHYKPLQ8IUZ5 450 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 KYQ8NBH2 561 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 OR6C4Q8NGE1 309 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 WDR48Q8TAF3 677 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 CCDC110Q8TBZ0 833 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 IFI44Q8TCB0 444 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 DTX3LQ8TDB6 740 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 GPBAR1Q8TDU6 330 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 ANP32BQ92688 251 aaKnown RBP12.69□□□□□ -0.38
VPREB3-201ENST00000248948 EID2BQ96D98 161 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 RTP4Q96DX8 246 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 OR2M4Q96R27 311 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 AGAP2Q99490 1192 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 TMEM168Q9H0V1 697 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 C10orf88Q9H8K7 445 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 RMI1Q9H9A7 625 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 FEZ2Q9UHY8 353 aaPredicted RBP12.69□□□□□ -0.38
VPREB3-201ENST00000248948 SUFUQ9UMX1 484 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 SHOC2Q9UQ13 582 aa12.69□□□□□ -0.38
VPREB3-201ENST00000248948 R3HDM2Q9Y2K5 976 aaKnown RBP12.69□□□□□ -0.38
VPREB3-201ENST00000248948 TCRBV7S2A1N4TA0A589 114 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 F5H423 210 aaPredicted RBP12.68□□□□□ -0.38
VPREB3-201ENST00000248948 LIASO43766 372 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 PROS1P07225 676 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 ADRA1AP35348 466 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 GNPDA1P46926 289 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 DOK6Q6PKX4 331 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 ARHGEF18Q6ZSZ5 1173 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 EFL1Q7Z2Z2 1120 aaKnown RBP12.68□□□□□ -0.38
VPREB3-201ENST00000248948 TRIM74Q86UV6 250 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 GALNT13Q8IUC8 556 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 TTC30BQ8N4P2 665 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 DCBLD1Q8N8Z6 715 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 GPR26Q8NDV2 337 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 VPS35Q96QK1 796 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 C19orf43Q9BQ61 176 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 FICDQ9BVA6 458 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.68□□□□□ -0.38
VPREB3-201ENST00000248948 MOSPD1Q9UJG1 213 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 GPR34Q9UPC5 381 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 CLCA2Q9UQC9 943 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 ZKSCAN5Q9Y2L8 839 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 FREM2Q5SZK8 3169 aa12.68□□□□□ -0.38
VPREB3-201ENST00000248948 C1QTNF9BB2RNN3 333 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 INPP4BO15327 924 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms