RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 AARSD1Q9BTE6 412 aaKnown RBP25.46■■□□□ 1.67
RAB40C-201ENST00000248139 RNF112Q9ULX5 631 aa25.46■■□□□ 1.67
RAB40C-201ENST00000248139 MANSC4A6NHS7 340 aaPredicted RBP25.45■■□□□ 1.67
RAB40C-201ENST00000248139 OR1I1O60431 355 aa25.45■■□□□ 1.67
RAB40C-201ENST00000248139 CASP2P42575 452 aa25.45■■□□□ 1.67
RAB40C-201ENST00000248139 CDH15P55291 814 aa25.45■■□□□ 1.67
RAB40C-201ENST00000248139 RNF19BQ6ZMZ0 732 aa25.45■■□□□ 1.67
RAB40C-201ENST00000248139 DNAJB14Q8TBM8 379 aa25.45■■□□□ 1.67
RAB40C-201ENST00000248139 NUDT8Q8WV74 236 aa25.45■■□□□ 1.67
RAB40C-201ENST00000248139 FAM193BQ96PV7 902 aaPredicted RBP25.45■■□□□ 1.67
RAB40C-201ENST00000248139 MRPS26Q9BYN8 205 aaKnown RBP25.45■■□□□ 1.67
RAB40C-201ENST00000248139 VWA8A3KMH1 1905 aa25.45■■□□□ 1.66
RAB40C-201ENST00000248139 DRGXA6NNA5 263 aa25.45■■□□□ 1.66
RAB40C-201ENST00000248139 TLR5O60602 858 aa25.45■■□□□ 1.66
RAB40C-201ENST00000248139 TACR2P21452 398 aa25.45■■□□□ 1.66
RAB40C-201ENST00000248139 PCSK6P29122 969 aa25.45■■□□□ 1.66
RAB40C-201ENST00000248139 STC1P52823 247 aa25.45■■□□□ 1.66
RAB40C-201ENST00000248139 PRKCZQ05513 592 aa25.45■■□□□ 1.66
RAB40C-201ENST00000248139 RPS6KA2Q15349 733 aa25.45■■□□□ 1.66
RAB40C-201ENST00000248139 TRIM71Q2Q1W2 868 aaKnown RBP25.45■■□□□ 1.66
RAB40C-201ENST00000248139 FUT11Q495W5 492 aa25.45■■□□□ 1.66
RAB40C-201ENST00000248139 ZBTB49Q6ZSB9 765 aa25.45■■□□□ 1.66
RAB40C-201ENST00000248139 SLC15A3Q8IY34 581 aa25.45■■□□□ 1.66
RAB40C-201ENST00000248139 ZNF597Q96LX8 424 aa25.45■■□□□ 1.66
RAB40C-201ENST00000248139 ZFYVE28Q9HCC9 887 aa25.45■■□□□ 1.66
RAB40C-201ENST00000248139 CMTM6Q9NX76 183 aa25.45■■□□□ 1.66
RAB40C-201ENST00000248139 ASB1Q9Y576 335 aa25.45■■□□□ 1.66
RAB40C-201ENST00000248139 CROCCQ5TZA2 2017 aa25.45■■□□□ 1.66
RAB40C-201ENST00000248139 ARHGAP10A1A4S6 786 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 NPEPPSL1A6NEC2 478 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 TSPAN3O60637 253 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 MTHFD1P11586 935 aaKnown RBP25.44■■□□□ 1.66
RAB40C-201ENST00000248139 CLCQ05315 142 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 PLA2G4EQ3MJ16 856 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 MDGA1Q8NFP4 955 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 GPR21Q99679 349 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 UPF3AQ9H1J1 476 aaKnown RBP25.44■■□□□ 1.66
RAB40C-201ENST00000248139 SLAMF8Q9P0V8 285 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 USP22Q9UPT9 525 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 PCDHGC4Q9Y5F7 938 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 FXYD1O00168 92 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 ANGPT2O15123 496 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 ECI2O75521 394 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 RTN3O95197 1032 aaPredicted RBP25.44■■□□□ 1.66
RAB40C-201ENST00000248139 SERPINF2P08697 491 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 OXTRP30559 389 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 PRKCQQ04759 706 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 ACVR1Q04771 509 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 RABL3Q5HYI8 236 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 HABP4Q5JVS0 413 aaKnown RBP25.44■■□□□ 1.66
RAB40C-201ENST00000248139 RAB44Q7Z6P3 723 aaPredicted RBP25.44■■□□□ 1.66
RAB40C-201ENST00000248139 MIER2Q8N344 545 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 FBXO39Q8N4B4 442 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 HBEGFQ99075 208 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 C1orf50Q9BV19 199 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 FNIP2Q9P278 1114 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 SLC4A7Q9Y6M7 1214 aa25.44■■□□□ 1.66
RAB40C-201ENST00000248139 MT-ND1P03886 318 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 FGF1P05230 155 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 GNAO1P09471 354 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 NCK1P16333 377 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 NFKB2Q00653 900 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 TRAP1Q12931 704 aaKnown RBP25.43■■□□□ 1.66
RAB40C-201ENST00000248139 PARP15Q460N3 678 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 GALNT7Q86SF2 657 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 PBXIP1Q96AQ6 731 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 FUBP3Q96I24 572 aaKnown RBP eCLIP25.43■■□□□ 1.66
RAB40C-201ENST00000248139 FEM1CQ96JP0 617 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 RBM38Q9H0Z9 239 aaKnown RBP25.43■■□□□ 1.66
RAB40C-201ENST00000248139 TLR8Q9NR97 1041 aaKnown RBP25.43■■□□□ 1.66
RAB40C-201ENST00000248139 V9GYQ6 96 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 CRCPO75575 148 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 VNN2O95498 520 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 CKBP12277 381 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 HLA-DPA1P20036 260 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 ACADVLP49748 655 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 PIANPQ8IYJ0 282 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 OR2T34Q8NGX1 318 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 OR2T3Q8NH03 318 aa25.43■■□□□ 1.66
RAB40C-201ENST00000248139 HTRA2O43464 458 aaPredicted RBP25.42■■□□□ 1.66
RAB40C-201ENST00000248139 NIPSNAP2O75323 286 aa25.42■■□□□ 1.66
RAB40C-201ENST00000248139 BAIAP3O94812 1187 aa25.42■■□□□ 1.66
RAB40C-201ENST00000248139 HOXD9P28356 352 aaPredicted RBP25.42■■□□□ 1.66
RAB40C-201ENST00000248139 PLOD1Q02809 727 aaPredicted RBP25.42■■□□□ 1.66
RAB40C-201ENST00000248139 APOFQ13790 326 aa25.42■■□□□ 1.66
RAB40C-201ENST00000248139 KANK2Q63ZY3 851 aa25.42■■□□□ 1.66
RAB40C-201ENST00000248139 SLC24A5Q71RS6 500 aa25.42■■□□□ 1.66
RAB40C-201ENST00000248139 PCYOX1LQ8NBM8 494 aa25.42■■□□□ 1.66
RAB40C-201ENST00000248139 CDK15Q96Q40 435 aa25.42■■□□□ 1.66
RAB40C-201ENST00000248139 GPATCH1Q9BRR8 931 aaKnown RBP25.42■■□□□ 1.66
RAB40C-201ENST00000248139 LIN28AQ9H9Z2 209 aaKnown RBP25.42■■□□□ 1.66
RAB40C-201ENST00000248139 PDFQ9HBH1 243 aa25.42■■□□□ 1.66
RAB40C-201ENST00000248139 SARS2Q9NP81 518 aaKnown RBP25.42■■□□□ 1.66
RAB40C-201ENST00000248139 ZFP37Q9Y6Q3 630 aaPredicted RBP25.42■■□□□ 1.66
RAB40C-201ENST00000248139 BTN3A1O00481 513 aa25.42■■□□□ 1.66
RAB40C-201ENST00000248139 SLC26A3P40879 764 aa25.42■■□□□ 1.66
RAB40C-201ENST00000248139 PTPRNQ16849 979 aa25.42■■□□□ 1.66
RAB40C-201ENST00000248139 TBCELQ5QJ74 424 aa25.42■■□□□ 1.66
RAB40C-201ENST00000248139 EFHBQ8N7U6 833 aa25.42■■□□□ 1.66
RAB40C-201ENST00000248139 SIDT2Q8NBJ9 832 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms