RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 ARHGEF7Q14155 803 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 ELAVL3Q14576 367 aaKnown RBP14.13□□□□□ -0.15
SDF2-201ENST00000247020 ZNF234Q14588 700 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 ACAP2Q15057 778 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 CHI3L2Q15782 390 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 ARSIQ5FYB1 569 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 LRRC66Q68CR7 880 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 LRRC8EQ6NSJ5 796 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 ZNF549Q6P9A3 640 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 FAM47EQ6ZV65 393 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 KCTD4Q8WVF5 259 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 GPR78Q96P69 363 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 NDNQ99608 321 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 MECRQ9BV79 373 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 MRPL46Q9H2W6 279 aaKnown RBP14.13□□□□□ -0.15
SDF2-201ENST00000247020 ZNF358Q9NW07 568 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 GTSE1Q9NYZ3 720 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 PKD2L2Q9NZM6 624 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 KLHL14Q9P2G3 628 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 B4GALT6Q9UBX8 382 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 CD207Q9UJ71 328 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 RANBP2P49792 3224 aaKnown RBP14.13□□□□□ -0.15
SDF2-201ENST00000247020 UBA6A0AVT1 1052 aaPredicted RBP14.13□□□□□ -0.15
SDF2-201ENST00000247020 TBC1D3BA6NDS4 549 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 PSMD11O00231 422 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 SERPINE1P05121 402 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 CTSLP07711 333 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 FGF3P11487 239 aaPredicted RBP14.13□□□□□ -0.15
SDF2-201ENST00000247020 PKMP14618 531 aaKnown RBP14.13□□□□□ -0.15
SDF2-201ENST00000247020 HNRNPLP14866 589 aaKnown RBP eCLIP14.13□□□□□ -0.15
SDF2-201ENST00000247020 ZNF7P17097 686 aaPredicted RBP14.13□□□□□ -0.15
SDF2-201ENST00000247020 SKIV2L2P42285 1042 aaKnown RBP14.13□□□□□ -0.15
SDF2-201ENST00000247020 CDKN2DP55273 166 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 PTSQ03393 145 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 NFATC2Q13469 925 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 HTR4Q13639 388 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 ITGA9Q13797 1035 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 CGB2Q6NT52 195 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 UGT3A1Q6NUS8 523 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 ZYG11AQ6WRX3 759 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 DPPA4Q7L190 304 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 OTOAQ7RTW8 1153 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 DSG4Q86SJ6 1040 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 PIANPQ8IYJ0 282 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 MICALL1Q8N3F8 863 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 FSTL5Q8N475 847 aaPredicted RBP14.13□□□□□ -0.15
SDF2-201ENST00000247020 OR6Y1Q8NGX8 325 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 KCNJ9Q92806 393 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 PBXIP1Q96AQ6 731 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 ULK4Q96C45 1275 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 PPP1R16AQ96I34 528 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 TTYH1Q9H313 450 aaPredicted RBP14.13□□□□□ -0.15
SDF2-201ENST00000247020 SLCO1B3Q9NPD5 702 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 THAP1Q9NVV9 213 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 CKAP5Q14008 2032 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 C16orf96A6NNT2 1141 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 TARM1B6A8C7 271 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 G3V2L1 256 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 H3BMM5 538 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 PRMT5O14744 637 aaPredicted RBP14.12□□□□□ -0.15
SDF2-201ENST00000247020 VPS26AO75436 327 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 SNUPNO95149 360 aaKnown RBP14.12□□□□□ -0.15
SDF2-201ENST00000247020 MYL2P10916 166 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 CHRM1P11229 460 aaPredicted RBP14.12□□□□□ -0.15
SDF2-201ENST00000247020 RALBP11234 206 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 TIMP2P16035 220 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 ZNF37AP17032 561 aaPredicted RBP14.12□□□□□ -0.15
SDF2-201ENST00000247020 LHCGRP22888 699 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 XPAP23025 273 aaPredicted RBP14.12□□□□□ -0.15
SDF2-201ENST00000247020 ITGB7P26010 798 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 ACRV1P26436 265 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 SPINT3P49223 89 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 OCRLQ01968 901 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 MESP2Q0VG99 397 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 BST1Q10588 318 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 STX3Q13277 289 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 PDAP1Q13442 181 aaKnown RBP14.12□□□□□ -0.15
SDF2-201ENST00000247020 ENPP2Q13822 863 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 ZNF460Q14592 562 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 GRIN2CQ14957 1233 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 PTPRRQ15256 657 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 TECRLQ5HYJ1 363 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 C9orf64Q5T6V5 341 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 ERAP2Q6P179 960 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 C6orf89Q6UWU4 347 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 TAS2R42Q7RTR8 314 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 TSPAN33Q86UF1 283 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 RBFAQ8N0V3 343 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 TMEM151AQ8N4L1 468 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 PPP1R14CQ8TAE6 165 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 MYLIPQ8WY64 445 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 NXNL1Q96CM4 212 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 CCDC126Q96EE4 140 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 BIRC8Q96P09 236 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 SIKE1Q9BRV8 207 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 P2RY12Q9H244 342 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 ASB8Q9H765 288 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 IL26Q9NPH9 171 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 TRPV5Q9NQA5 729 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 IGSF5Q9NSI5 407 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms