RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 THOP1P52888 689 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 ZNF655Q8N720 491 aaPredicted RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 MFSD3Q96ES6 412 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 TLR5O60602 858 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 S100A9P06702 114 aaKnown RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 PAICSP22234 425 aaKnown RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 LPAR1Q92633 364 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 CCDC115Q96NT0 180 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 RAB23Q9ULC3 237 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 PRKACGP22612 351 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 ACSM2AQ08AH3 577 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 ACSM2BQ68CK6 577 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 PDE12Q6L8Q7 609 aaKnown RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 LIX1Q8N485 282 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 H3BM21 787 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 HDAC3O15379 428 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 PSMD10O75832 226 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 SCGNO76038 276 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 PRKCGP05129 697 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 ABHD2P08910 425 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 MAP2K4P45985 399 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 GPR153Q6NV75 609 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 OR2T34Q8NGX1 318 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 OR2T3Q8NH03 318 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 SMG7Q92540 1137 aaKnown RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 TAS2R1Q9NYW7 299 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 A0A0G2JN53 185 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 NT5C1B-RDH14C9J2C7 533 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 ZNF648Q5T619 568 aaPredicted RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 HMGN2P46Q86SG4 172 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 RAVER1Q8IY67 606 aaKnown RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 SIDT2Q8NBJ9 832 aaKnown RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 ATP6V1C2Q8NEY4 427 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 MYDGFQ969H8 173 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 CRAMP1Q96RY5 1269 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 ELOVL4Q9GZR5 314 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 COMMD3Q9UBI1 195 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 DHRS7Q9Y394 339 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 KPNA3O00505 521 aaPredicted RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 OR6A2O95222 327 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 TTKP33981 857 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 HSF2Q03933 536 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 FCHO2Q0JRZ9 810 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 PTPRCAPQ14761 206 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 RBM23Q86U06 439 aaKnown RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 RP9Q8TA86 221 aaKnown RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 TDRD1Q9BXT4 1180 aaKnown RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 CST3P01034 146 aaPredicted RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 CYP2C18P33260 490 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 IL2P60568 153 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 ASB12Q8WXK4 309 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 CDT1Q9H211 546 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.5□□□□□ -1.211e-7■■■■■ 37.7
RIF1-201ENST00000243326 SNX7Q9UNH6 387 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 ASTN2O75129 1339 aaPredicted RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 NDUFS2O75306 463 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 ERAL1O75616 437 aaKnown RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 CAPGP40121 348 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.5□□□□□ -1.21
RIF1-201ENST00000243326 MEP1AQ16819 746 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 FRMD7Q6ZUT3 714 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 MAP4K3Q8IVH8 894 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 KBTBD8Q8NFY9 601 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 C17orf50Q8WW18 174 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 SEMA3CQ99985 751 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 LRRC14BA6NHZ5 514 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 SLC22A3O75751 556 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 ENO2P09104 434 aaPredicted RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 P2RX7Q99572 595 aaKnown RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 HMGXB4Q9UGU5 601 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 TRIM64CA6NLI5 447 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 HSPA7P48741 367 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 SLC18A2Q05940 514 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 SNX29P2Q8IUI4 249 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 KCNMB3Q9NPA1 279 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 SPEF1Q9Y4P9 236 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 GPC6Q9Y625 555 aaPredicted RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 TMEM88BA6NKF7 163 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 FGRP09769 529 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 MUTP22033 750 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 CDKN2BP42772 138 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 ZNF157P51786 506 aaPredicted RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 BRSK2Q8IWQ3 736 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 EEF1AKMT1Q8WVE0 214 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 C19orf60Q96EN9 201 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 ABHD14A-ACY1A0A1B0GW23 586 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 A0A1W2PRG6 482 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 HPGDP15428 266 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 MON1BQ7L1V2 547 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 RASGEF1CQ8N431 466 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 STOML2Q9UJZ1 356 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 PSKH1P11801 424 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 MAPKAPK2P49137 400 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 TRAP1Q12931 704 aaKnown RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 CDK20Q8IZL9 346 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 VGLL2Q8N8G2 317 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 STARD7Q9NQZ5 370 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 PSMD13Q9UNM6 376 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 POLR1DQ9Y2S0 133 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 LOC100509620A0A075B734 347 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms