RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 HELZP42694 1942 aaKnown RBP18.4■□□□□ 0.54
HOXC11-201ENST00000243082 A0A0J9YYE9 177 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 LOC100653049A0A140TA62 436 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 UBFD1O14562 309 aaKnown RBP18.4■□□□□ 0.54
HOXC11-201ENST00000243082 GPR39O43194 453 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 SOCS5O75159 536 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 SMIM24O75264 130 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 KRT34O76011 436 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 TRBC1P01850 177 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 SRCP12931 536 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 PTPN2P17706 415 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 CD9P21926 228 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 STK19P49842 368 aaPredicted RBP18.4■□□□□ 0.54
HOXC11-201ENST00000243082 LBX1P52954 281 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 SLC25A3Q00325 362 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 CDKN3Q16667 212 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 KHDC1Q4VXA5 237 aaKnown RBP18.4■□□□□ 0.54
HOXC11-201ENST00000243082 SPRED2Q7Z698 418 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 CPSF7Q8N684 471 aaKnown RBP18.4■□□□□ 0.54
HOXC11-201ENST00000243082 WDR60Q8WVS4 1066 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 KIAA1191Q96A73 305 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 TRMOQ9BU70 441 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 CXorf51AA0A1B0GTR3 108 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 TRPC5OSA6NMA1 111 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 UBXN8O00124 270 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 SDHDO14521 159 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 PFDN6O15212 129 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 IGSF6O95976 241 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 RHOP08100 348 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 COX4I1P13073 169 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 CD1EP15812 388 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 DDX6P26196 483 aaKnown RBP eCLIP18.39■□□□□ 0.53
HOXC11-201ENST00000243082 ADARP55265 1226 aaKnown RBP18.39■□□□□ 0.53
HOXC11-201ENST00000243082 HERVK_113P63132 956 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 CACNG1Q06432 222 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 KPNB1Q14974 876 aaKnown RBP18.39■□□□□ 0.53
HOXC11-201ENST00000243082 SLC5A9Q2M3M2 681 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 AARS2Q5JTZ9 985 aaKnown RBP18.39■□□□□ 0.53
HOXC11-201ENST00000243082 TMEM198Q66K66 360 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 ASTLQ6HA08 431 aaPredicted RBP18.39■□□□□ 0.53
HOXC11-201ENST00000243082 PSRC1Q6PGN9 363 aaPredicted RBP18.39■□□□□ 0.53
HOXC11-201ENST00000243082 TAS2R42Q7RTR8 314 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 SCUBE1Q8IWY4 988 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 OR2AP1Q8NGE2 309 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 EXT2Q93063 718 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 CLPTM1LQ96KA5 538 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 LENG8Q96PV6 779 aaPredicted RBP18.39■□□□□ 0.53
HOXC11-201ENST00000243082 THTPAQ9BU02 230 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 ERVK-6Q9BXR3 956 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 GBF1Q92538 1859 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 GAPDHSO14556 408 aaPredicted RBP18.39■□□□□ 0.53
HOXC11-201ENST00000243082 NIPSNAP2O75323 286 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 SUPT7LO94864 414 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 FGF19O95750 216 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 IRS1P35568 1242 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 PTGER3P43115 390 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 BTKQ06187 659 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 RAD51Q06609 339 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 CAMK1Q14012 370 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 FUT11Q495W5 492 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 RTL10Q7L3V2 364 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 ZSWIM9Q86XI8 627 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 ULK2Q8IYT8 1036 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 PTGR2Q8N8N7 351 aaPredicted RBP18.39■□□□□ 0.53
HOXC11-201ENST00000243082 ENDOVQ8N8Q3 282 aaKnown RBP18.39■□□□□ 0.53
HOXC11-201ENST00000243082 MICAL1Q8TDZ2 1067 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 HERVK_113Q902F9 699 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 FAR2Q96K12 515 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 C17orf80Q9BSJ5 609 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 P2RY12Q9H244 342 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 ATP13A3Q9H7F0 1226 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 ZFYVE1Q9HBF4 777 aa18.39■□□□□ 0.53
HOXC11-201ENST00000243082 CHD7Q9P2D1 2997 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 KERAO60938 352 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 VPS26AO75436 327 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 TSPAN12O95859 305 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 PYGLP06737 847 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 PIK3R1P27986 724 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 HNF1BP35680 557 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 ATP6V0D1P61421 351 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 ACSBG2Q5FVE4 666 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 NXNQ6DKJ4 435 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 NKAPQ8N5F7 415 aaKnown RBP18.38■□□□□ 0.53
HOXC11-201ENST00000243082 SIDT2Q8NBJ9 832 aaKnown RBP18.38■□□□□ 0.53
HOXC11-201ENST00000243082 GIMAP7Q8NHV1 300 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 STAG3L4Q8TBR4 150 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 PHOSPHO2Q8TCD6 241 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 FAM161BQ96MY7 647 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 TDP1Q9NUW8 608 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 G3BP2Q9UN86 482 aaKnown RBP18.38■□□□□ 0.53
HOXC11-201ENST00000243082 HS3ST2Q9Y278 367 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 FIS1Q9Y3D6 152 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 SLC30A1Q9Y6M5 507 aa18.38■□□□□ 0.53
HOXC11-201ENST00000243082 MYOFQ9NZM1 2061 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 A0A088AWK7 358 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 LINC01553A4QN01 128 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 EPCAMP16422 314 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 TSPAN8P19075 237 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 PFKFB4Q16877 469 aa18.37■□□□□ 0.53
HOXC11-201ENST00000243082 WLSQ5T9L3 541 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms