RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 FBXO6Q9NRD1 293 aaPredicted RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 NKX1-2Q9UD57 310 aaPredicted RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 TAGLN3Q9UI15 199 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 ANKRD6Q9Y2G4 727 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 IPPQ9Y573 584 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 SCN4AP35499 1836 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 A0A0A6YYJ9 748 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 SPECC1L-ADORA2AF8WAN1 911 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 M0QYT0 321 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 ETV2O00321 342 aaPredicted RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 CYB561D2O14569 222 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 PSMD3O43242 534 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 AKAP10O43572 662 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 HCRTO43612 131 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 KLHL2O95198 593 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 AP2A1O95782 977 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 GSRP00390 522 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 ALDOAP04075 364 aaKnown RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 ITGA2BP08514 1039 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 RPSAP08865 295 aaKnown RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 CLEC2LP0C7M8 214 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 ALOX15P16050 662 aaPredicted RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 ACADSP16219 412 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 ATP6V1C1P21283 382 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 PAX3P23760 479 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 DNAJB1P25685 340 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 MGAT1P26572 445 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 PSMB4P28070 264 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 THBS2P35442 1172 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 HADHAP40939 763 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 GRIA1P42261 906 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 LIMS1P48059 325 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 RAB27AP51159 221 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 DAOAP59103 153 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 IL13RA1P78552 427 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 PPIDQ08752 370 aaKnown RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 AP1B1Q10567 949 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 TAF11Q15544 211 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 ANO4Q32M45 955 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 TRMT5Q32P41 509 aaKnown RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 ARL13BQ3SXY8 428 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 FASTKD1Q53R41 847 aaKnown RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 RAB41Q5JT25 222 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 ITPRIPL1Q6GPH6 555 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 TAF2Q6P1X5 1199 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 CASC4Q6P4E1 433 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 CLEC20AQ6ZU45 233 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 PAQR9Q6ZVX9 377 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 TMEM135Q86UB9 458 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 TLK2Q86UE8 772 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 LCA5Q86VQ0 697 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 APLFQ8IW19 511 aaPredicted RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 TMEM151BQ8IW70 566 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 KLHDC8BQ8IXV7 354 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 ZNF567Q8N184 647 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 SCML4Q8N228 414 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 PYROXD2Q8N2H3 581 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 PPP1R14CQ8TAE6 165 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 DNAJB3Q8WWF6 145 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 STON2Q8WXE9 905 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 HDAC11Q96DB2 347 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 CERS2Q96G23 380 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 ZSWIM3Q96MP5 696 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 MECRQ9BV79 373 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 TRIM62Q9BVG3 475 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 CCDC106Q9BWC9 280 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 APOL6Q9BWW8 343 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 PITHD1Q9GZP4 211 aaPredicted RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 QRSL1Q9H0R6 528 aaKnown RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 TCF7L1Q9HCS4 588 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 BFARQ9NZS9 450 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 ZIM2Q9NZV7 527 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 TXNDC16Q9P2K2 825 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 STX18Q9P2W9 335 aaKnown RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 DNAJB4Q9UDY4 337 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 MID2Q9UJV3 735 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 EMCNQ9ULC0 261 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 TSC2P49815 1807 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 PTGESO14684 152 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 TPP1O14773 563 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 ADCY6O43306 1168 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 KIF1CO43896 1103 aaKnown RBP7.94□□□□□ -1.14
CXCR4-201ENST00000241393 ENTPD5O75356 428 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 H2AFYO75367 372 aaKnown RBP7.94□□□□□ -1.14
CXCR4-201ENST00000241393 USP1O94782 785 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 PCDH8O95206 1070 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 PARNO95453 639 aaKnown RBP7.94□□□□□ -1.14
CXCR4-201ENST00000241393 RPLP2P05387 115 aaKnown RBP7.94□□□□□ -1.14
CXCR4-201ENST00000241393 FGF3P11487 239 aaPredicted RBP7.94□□□□□ -1.14
CXCR4-201ENST00000241393 PTPN3P26045 913 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 CYP2C18P33260 490 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 SERPINB6P35237 376 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 SPRP35270 261 aaPredicted RBP7.94□□□□□ -1.14
CXCR4-201ENST00000241393 PGM1P36871 562 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 VHLP40337 213 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 PTDSS1P48651 473 aaKnown RBP7.94□□□□□ -1.14
CXCR4-201ENST00000241393 NPY2RP49146 381 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 SERPINB8P50452 374 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 CSE1LP55060 971 aaKnown RBP7.94□□□□□ -1.14
CXCR4-201ENST00000241393 AQP5P55064 265 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms