RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 KIAA1191Q96A73 305 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 TTC1Q99614 292 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 ERVK-6Q9BXR3 956 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 MRGBPQ9NV56 204 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 DPP7Q9UHL4 492 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 MED16Q9Y2X0 877 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 GBF1Q92538 1859 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 MOSPD3O75425 235 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 EZRP15311 586 aaKnown RBP23.16■■□□□ 1.3
MSX2-201ENST00000239243 CDKN1CP49918 316 aaPredicted RBP23.16■■□□□ 1.3
MSX2-201ENST00000239243 UGT3A1Q6NUS8 523 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 PAQR3Q6TCH7 311 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 TAS2R42Q7RTR8 314 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 GPR21Q99679 349 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 WDR55Q9H6Y2 383 aaPredicted RBP23.16■■□□□ 1.3
MSX2-201ENST00000239243 TRMT6Q9UJA5 497 aaKnown RBP23.16■■□□□ 1.3
MSX2-201ENST00000239243 APPL1Q9UKG1 709 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 PCDHB1Q9Y5F3 818 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 GOLGA8QA0A0J9YX86 632 aa23.15■■□□□ 1.3
MSX2-201ENST00000239243 GOLGA8OA6NCC3 632 aa23.15■■□□□ 1.3
MSX2-201ENST00000239243 GOLGA8NF8WBI6 632 aa23.15■■□□□ 1.3
MSX2-201ENST00000239243 NEMP1O14524 444 aa23.15■■□□□ 1.3
MSX2-201ENST00000239243 KERAO60938 352 aa23.15■■□□□ 1.3
MSX2-201ENST00000239243 ZNF821O75541 412 aaPredicted RBP23.15■■□□□ 1.3
MSX2-201ENST00000239243 RB1P06400 928 aa23.15■■□□□ 1.3
MSX2-201ENST00000239243 HNRNPLP14866 589 aaKnown RBP eCLIP23.15■■□□□ 1.3
MSX2-201ENST00000239243 EPHA3P29320 983 aa23.15■■□□□ 1.3
MSX2-201ENST00000239243 SULT2A1Q06520 285 aa23.15■■□□□ 1.3
MSX2-201ENST00000239243 LSM12Q3MHD2 195 aaKnown RBP23.15■■□□□ 1.3
MSX2-201ENST00000239243 CUZD1Q86UP6 607 aa23.15■■□□□ 1.3
MSX2-201ENST00000239243 CEP44Q9C0F1 390 aa23.15■■□□□ 1.3
MSX2-201ENST00000239243 TNKS2Q9H2K2 1166 aa23.15■■□□□ 1.3
MSX2-201ENST00000239243 GSTO2Q9H4Y5 243 aa23.15■■□□□ 1.3
MSX2-201ENST00000239243 FNDC3AQ9Y2H6 1198 aaKnown RBP23.15■■□□□ 1.3
MSX2-201ENST00000239243 C1orf232A0A0U1RR37 186 aa23.14■■□□□ 1.3
MSX2-201ENST00000239243 CAPN8A6NHC0 703 aa23.14■■□□□ 1.3
MSX2-201ENST00000239243 SYCE1LA8MT33 242 aa23.14■■□□□ 1.3
MSX2-201ENST00000239243 LMNAP02545 664 aaKnown RBP23.14■■□□□ 1.3
MSX2-201ENST00000239243 KCNC1P48547 511 aa23.14■■□□□ 1.3
MSX2-201ENST00000239243 RAP1GDS1P52306 607 aa23.14■■□□□ 1.3
MSX2-201ENST00000239243 DMC1Q14565 340 aa23.14■■□□□ 1.3
MSX2-201ENST00000239243 NAA25Q14CX7 972 aa23.14■■□□□ 1.3
MSX2-201ENST00000239243 PDCD2Q16342 344 aaPredicted RBP23.14■■□□□ 1.3
MSX2-201ENST00000239243 DGKKQ5KSL6 1271 aa23.14■■□□□ 1.3
MSX2-201ENST00000239243 TMEM25Q86YD3 366 aa23.14■■□□□ 1.3
MSX2-201ENST00000239243 MAELQ96JY0 434 aaKnown RBP23.14■■□□□ 1.3
MSX2-201ENST00000239243 ATOH8Q96SQ7 321 aa23.14■■□□□ 1.3
MSX2-201ENST00000239243 C17orf80Q9BSJ5 609 aa23.14■■□□□ 1.3
MSX2-201ENST00000239243 BBS2Q9BXC9 721 aa23.14■■□□□ 1.3
MSX2-201ENST00000239243 DENND2DQ9H6A0 471 aaPredicted RBP23.14■■□□□ 1.3
MSX2-201ENST00000239243 CD248Q9HCU0 757 aa23.14■■□□□ 1.3
MSX2-201ENST00000239243 MTF2Q9Y483 593 aaPredicted RBP23.14■■□□□ 1.3
MSX2-201ENST00000239243 SUPT7LO94864 414 aa23.14■■□□□ 1.29
MSX2-201ENST00000239243 NAA20P61599 178 aa23.14■■□□□ 1.29
MSX2-201ENST00000239243 KLF10Q13118 480 aa23.14■■□□□ 1.29
MSX2-201ENST00000239243 PTPRRQ15256 657 aa23.14■■□□□ 1.29
MSX2-201ENST00000239243 FUT11Q495W5 492 aa23.14■■□□□ 1.29
MSX2-201ENST00000239243 C22orf39Q6P5X5 142 aa23.14■■□□□ 1.29
MSX2-201ENST00000239243 DNAJC5GQ8N7S2 189 aa23.14■■□□□ 1.29
MSX2-201ENST00000239243 IRF7Q92985 503 aa23.14■■□□□ 1.29
MSX2-201ENST00000239243 OTUB2Q96DC9 234 aa23.14■■□□□ 1.29
MSX2-201ENST00000239243 RPL10LQ96L21 214 aaKnown RBP23.14■■□□□ 1.29
MSX2-201ENST00000239243 E5RI56 91 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 NEDD8-MDP1E9PL57 170 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 OR4D1Q15615 310 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 SETMARQ53H47 684 aaPredicted RBP23.13■■□□□ 1.29
MSX2-201ENST00000239243 ELMSAN1Q6PJG2 1045 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 CPSF7Q8N684 471 aaKnown RBP23.13■■□□□ 1.29
MSX2-201ENST00000239243 PCDH20Q8N6Y1 951 aaKnown RBP23.13■■□□□ 1.29
MSX2-201ENST00000239243 FAM136AQ96C01 138 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 EID2BQ96D98 161 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 LYSMD1Q96S90 227 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 SPHK2Q9NRA0 654 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 RNF112Q9ULX5 631 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 PLA2G4CQ9UP65 541 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 ALPK3Q96L96 1907 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 H3BMM5 538 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 TM7SF2O76062 418 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 PRAMEF12O95522 483 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 TCF3P15923 654 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 ZRSR2Q15696 482 aaKnown RBP23.13■■□□□ 1.29
MSX2-201ENST00000239243 MYLK3Q32MK0 819 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 CTSL3PQ5NE16 218 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 PHTF2Q8N3S3 785 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 PTGR2Q8N8N7 351 aaPredicted RBP23.13■■□□□ 1.29
MSX2-201ENST00000239243 CEP70Q8NHQ1 597 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 ZDHHC7Q9NXF8 308 aa23.13■■□□□ 1.29
MSX2-201ENST00000239243 ZNF197O14709 1029 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 PRMT5O14744 637 aaPredicted RBP23.12■■□□□ 1.29
MSX2-201ENST00000239243 OR1I1O60431 355 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 PABPC1P11940 636 aaKnown RBP23.12■■□□□ 1.29
MSX2-201ENST00000239243 EPCAMP16422 314 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 EN2P19622 333 aaPredicted RBP23.12■■□□□ 1.29
MSX2-201ENST00000239243 ITGALP20701 1170 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 HNF1BP35680 557 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 CTSOP43234 321 aaPredicted RBP23.12■■□□□ 1.29
MSX2-201ENST00000239243 ZNF77Q15935 545 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 SLC5A9Q2M3M2 681 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 LYPLAL1Q5VWZ2 237 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 NXNQ6DKJ4 435 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms