RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 T-ENOLP0DO92 83 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 HLA-EP13747 358 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 GLDCP23378 1020 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 EPHA3P29320 983 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 CRHR1P34998 444 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 TNFRSF4P43489 277 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 NME5P56597 212 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 CDH18Q13634 790 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 SF3A2Q15428 464 aaKnown RBP8.65□□□□□ -1.02
VPS4B-201ENST00000238497 MPPE1Q53F39 396 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 ADGRF1Q5T601 910 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 BHLHA9Q7RTU4 235 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 WDR5BQ86VZ2 330 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 MFN1Q8IWA4 741 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 HDAC11Q96DB2 347 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 MYEOVQ96EZ4 313 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 ZNF419Q96HQ0 510 aaPredicted RBP8.65□□□□□ -1.02
VPS4B-201ENST00000238497 CPNE1Q99829 537 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 NAT9Q9BTE0 207 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 ZYG11BQ9C0D3 744 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 SEMA4GQ9NTN9 838 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 ABCB8Q9NUT2 735 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 FAM8A1Q9UBU6 413 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 CYP8B1Q9UNU6 501 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 RALGAPA1Q6GYQ0 2036 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 ATP6AP2A0A1C7CYW4 349 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 ATP6AP2O75787 350 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 PDHA1P08559 390 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 PRSS56P0CW18 603 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 GEMP55040 296 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 CSE1LP55060 971 aaKnown RBP8.65□□□□□ -1.02
VPS4B-201ENST00000238497 NSUN2Q08J23 767 aaKnown RBP eCLIP8.65□□□□□ -1.02
VPS4B-201ENST00000238497 CUL3Q13618 768 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 KPNB1Q14974 876 aaKnown RBP8.65□□□□□ -1.02
VPS4B-201ENST00000238497 TRIP4Q15650 581 aaPredicted RBP8.65□□□□□ -1.02
VPS4B-201ENST00000238497 MS4A13Q5J8X5 152 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 GRTP1Q5TC63 336 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 NEPROQ6NW34 567 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 MAMSTRQ6ZN01 415 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 SDCCAG8Q86SQ7 713 aaPredicted RBP8.65□□□□□ -1.02
VPS4B-201ENST00000238497 FAM124AQ86V42 546 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 ZNF781Q8N8C0 355 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 FAM13CQ8NE31 585 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 OR52K2Q8NGK3 314 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 TBATAQ96M53 351 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 TM6SF2Q9BZW4 377 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 FAM96AQ9H5X1 160 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 THAP1Q9NVV9 213 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 PCDHGC4Q9Y5F7 938 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 FAM95CA0A1B0GW59 222 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 F5H5T6 163 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 GREM1O60565 184 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 CCDC22O60826 627 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 LILRB5O75023 590 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 GSTA2P09210 222 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 TDGF1P13385 188 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 STMN1P16949 149 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 MPSTP25325 297 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 KIR2DL1P43626 348 aaPredicted RBP8.65□□□□□ -1.03
VPS4B-201ENST00000238497 SERPINB8P50452 374 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 RBM20Q5T481 1227 aaKnown RBP8.65□□□□□ -1.03
VPS4B-201ENST00000238497 TCEAL6Q6IPX3 200 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 ISLR2Q6UXK2 745 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 Q6ZNB5 142 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 TREML1Q86YW5 311 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 ARHGAP12Q8IWW6 846 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 PIWIL2Q8TC59 973 aaKnown RBP8.65□□□□□ -1.03
VPS4B-201ENST00000238497 IRGQQ8WZA9 623 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 TCEAL3Q969E4 200 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 RBBP8Q99708 897 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 DDX50Q9BQ39 737 aaKnown RBP8.65□□□□□ -1.03
VPS4B-201ENST00000238497 OSBPL1AQ9BXW6 950 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 ELOVL2Q9NXB9 296 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 UTP6Q9NYH9 597 aaKnown RBP8.65□□□□□ -1.03
VPS4B-201ENST00000238497 COPG2Q9UBF2 871 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 NKX1-2Q9UD57 310 aaPredicted RBP8.65□□□□□ -1.03
VPS4B-201ENST00000238497 ACOT9Q9Y305 439 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 OBSL1O75147 1896 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 MYO16Q9Y6X6 1858 aa8.65□□□□□ -1.03
VPS4B-201ENST00000238497 ZCWPW2A0A1B0GU75 182 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 DCDC2BA2VCK2 349 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 TMEM233B4DJY2 109 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 H0Y626 953 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 MATN3O15232 486 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 ACSL4O60488 711 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 ADAM23O75077 832 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 RHOBTB1O94844 696 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 PIGNO95427 931 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 MLNP12872 115 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 BCKDHBP21953 392 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 NPY2RP49146 381 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 RENBPP51606 427 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 CDH13P55290 713 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 TAS2R39P59534 338 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 RPL6Q02878 288 aaKnown RBP8.64□□□□□ -1.03
VPS4B-201ENST00000238497 ASPHQ12797 758 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 RSPO4Q2I0M5 234 aaPredicted RBP8.64□□□□□ -1.03
VPS4B-201ENST00000238497 LAYNQ6UX15 382 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 CHST9Q7L1S5 443 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 LINC00523Q86TU6 105 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms