RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 CDRT15Q96T59 188 aa11.7□□□□□ -0.54
TNFAIP1-201ENST00000226225 SIKE1Q9BRV8 207 aa11.7□□□□□ -0.54
TNFAIP1-201ENST00000226225 ZNF576Q9H609 170 aa11.7□□□□□ -0.54
TNFAIP1-201ENST00000226225 SSU72Q9NP77 194 aaKnown RBP11.7□□□□□ -0.54
TNFAIP1-201ENST00000226225 EIF2B3Q9NR50 452 aaKnown RBP11.7□□□□□ -0.54
TNFAIP1-201ENST00000226225 SPHK2Q9NRA0 654 aa11.7□□□□□ -0.54
TNFAIP1-201ENST00000226225 C5orf67F2Z3F1 127 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 CRTAMO95727 393 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 ITGAXP20702 1163 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 CTSOP43234 321 aaPredicted RBP11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 RPL5P46777 297 aaKnown RBP11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 STT3AP46977 705 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 ZNF33AQ06730 810 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 BCL2L1Q07817 233 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 CXorf57Q6NSI4 855 aaKnown RBP11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 DUS1LQ6P1R4 473 aaKnown RBP11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 UGT2A3Q6UWM9 527 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 CMC1Q7Z7K0 106 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 PGBD5Q8N414 524 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 CELF5Q8N6W0 485 aaKnown RBP11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 ATP2A3Q93084 1043 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 PPP1R2P1Q96PQ5 205 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 LRRC3Q9BY71 257 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 ZFP14Q9HCL3 533 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 PRM3Q9NNZ6 103 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 VPS45Q9NRW7 570 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 TSR3Q9UJK0 312 aaKnown RBP11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 SHROOM3Q8TF72 1996 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 TANC1Q9C0D5 1861 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 CCR10P46092 362 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 CYLC2Q14093 348 aaPredicted RBP11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 FLOT2Q14254 428 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 C16orf72Q14CZ0 275 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 TAS2R42Q7RTR8 314 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 TRIM42Q8IWZ5 723 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 SNX31Q8N9S9 440 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 BPIFB1Q8TDL5 484 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 HDAC10Q969S8 669 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 C7orf26Q96N11 449 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 FCRL3Q96P31 734 aaPredicted RBP11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 THAP1Q9NVV9 213 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 THG1LQ9NWX6 298 aaKnown RBP11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 H3BQ06 376 aaPredicted RBP11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 TPP1O14773 563 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 HLA-FP30511 346 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 CDH15P55291 814 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 PTPRRQ15256 657 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 SIRPB2Q5JXA9 342 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 GLT6D1Q7Z4J2 308 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 IMP4Q96G21 291 aaKnown RBP11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 PLEKHG4BQ96PX9 1271 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 KXD1Q9BQD3 176 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 ADGRE3Q9BY15 652 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 PPCSQ9HAB8 311 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 TLK1Q9UKI8 766 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 PSAT1Q9Y617 370 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 ARL5AQ9Y689 179 aa11.69□□□□□ -0.54
TNFAIP1-201ENST00000226225 MAGEB16A2A368 324 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 OR51F1A6NGY5 319 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 STX7O15400 261 aaKnown RBP11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 SMIM18P0DKX4 95 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 CDK4P11802 303 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 PABPC1P11940 636 aaKnown RBP11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 DDX6P26196 483 aaKnown RBP eCLIP11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 ARF5P84085 180 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 USP10Q14694 798 aaKnown RBP11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 SPANXN3Q5MJ09 141 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 PKN3Q6P5Z2 889 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 ATG14Q6ZNE5 492 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 ZNF707Q96C28 371 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 SCYL1Q96KG9 808 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 PSKH2Q96QS6 385 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 MTG2Q9H4K7 406 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 GPAMQ9HCL2 828 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 CASS4Q9NQ75 786 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 TBC1D30Q9Y2I9 924 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 COMMD10Q9Y6G5 202 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 HEATR9A2RTY3 570 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 HEPACAM2A8MVW5 462 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 PIGNO95427 931 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 HSPA4LO95757 839 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 IDH3AP50213 366 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 DLG2Q15700 870 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 FAM78AQ5JUQ0 283 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 Q6ZVU0 165 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 SNX32Q86XE0 403 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 DENND6AQ8IWF6 608 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 CPNE9Q8IYJ1 553 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 BHLHE22Q8NFJ8 381 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 GABPB2Q8TAK5 448 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 LENG8Q96PV6 779 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 CCT7Q99832 543 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 CCDC68Q9H2F9 335 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 CRYL1Q9Y2S2 319 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 SMIM31A0A1B0GVY4 71 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 IGSF6O95976 241 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 UGT2B4P06133 528 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 ARSAP15289 507 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 WASP42768 502 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms