RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 MBOAT7Q96N66 472 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 POLR3HQ9Y535 204 aaPredicted RBP14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 AP4B1Q9Y6B7 739 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 ASCC3Q8N3C0 2202 aaKnown RBP14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 B8ZZF3 427 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 IFNA7P01567 189 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 PTPN9P43378 593 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 SCGB2B2Q4G0G5 96 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 HDAC2Q92769 488 aaKnown RBP14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 OSMRQ99650 979 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 TCF7L1Q9HCS4 588 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 EIF5AP63241 154 aaKnown RBP14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 FSTL1Q12841 308 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 FBXO16Q8IX29 292 aaPredicted RBP14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 GALNT11Q8NCW6 608 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 TRPV4Q9HBA0 871 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 BDNFP23560 247 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 EIF4BP23588 611 aaKnown RBP14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 LAMTOR4Q0VGL1 99 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 ACVR2BQ13705 512 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 UBAP2Q5T6F2 1119 aaKnown RBP14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 AHSA2Q719I0 299 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 GPR180Q86V85 440 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 TMEM17Q86X19 198 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 KCNN3Q9UGI6 736 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 HACL1Q9UJ83 578 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 ALADP13716 330 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 ZNF16P17020 682 aaPredicted RBP14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 PVALBP20472 110 aaPredicted RBP14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 IL12BP29460 328 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 CHSY3Q70JA7 882 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 TMPRSS11BQ86T26 416 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 MPP5Q8N3R9 675 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 SPATA6LQ8N4H0 392 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 TEX19Q8NA77 164 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 GALNT6Q8NCL4 622 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 C8orf48Q96LL4 319 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 ABCD2Q9UBJ2 740 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 GAKO14976 1311 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 ZNF14P17017 642 aaPredicted RBP14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 CPTPQ5TA50 214 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 SIRT2Q8IXJ6 389 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 PMEPA1Q969W9 287 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 TCF12Q99081 682 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 LRMDAQ9H2I8 198 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 SGK2Q9HBY8 427 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 RIMKLBQ9ULI2 386 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 PLAGL2Q9UPG8 496 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 FADS2P1A8MWK0 482 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 FGBP02675 491 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 GPD2P43304 727 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 PGDP52209 483 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 CCDC107Q8WV48 283 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 LENG9Q96B70 501 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 C16orf58Q96GQ5 468 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 PDLIM2Q96JY6 352 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 LGR4Q9BXB1 951 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 MALT1Q9UDY8 824 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 PLEKHA6Q9Y2H5 1048 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 MAP4K5Q9Y4K4 846 aa14.57□□□□□ -0.08
SPTLC2-201ENST00000216484 DDX3XO00571 662 aaKnown RBP eCLIP14.56□□□□□ -0.081e-9■■■■■ 26.9
SPTLC2-201ENST00000216484 KAT7O95251 611 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 NR4A1P22736 598 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 PRKCHP24723 683 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 HERVK_113P62684 666 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 CD83Q01151 205 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 GPR139Q6DWJ6 353 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 TMEM161BQ8NDZ6 487 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 ACAT2Q9BWD1 397 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 TRAV19A0A0A6YYK7 116 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 ATP6AP2A0A1C7CYW4 349 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 M0R129 80 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 SMAD9O15198 467 aaKnown RBP14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 SLC22A3O75751 556 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 ATP6AP2O75787 350 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 PRKG2Q13237 762 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 ARSKQ6UWY0 536 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 TMEM192Q8IY95 271 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 NKAPQ8N5F7 415 aaKnown RBP14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 C2orf73Q8N5S3 287 aaPredicted RBP14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 PTGR2Q8N8N7 351 aaPredicted RBP14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 ZNF709Q8N972 641 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 A0A1B0GVC2 190 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 CLDN25C9JDP6 229 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 IGFBP4P22692 258 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 CHRNA5P30532 468 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 ABL2P42684 1182 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 MAGEA11P43364 429 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 NPTX2P47972 431 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 SMARCB1Q12824 385 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 PUM1Q14671 1186 aaKnown RBP eCLIP14.56□□□□□ -0.082e-7■□□□□ 10.1
SPTLC2-201ENST00000216484 LZTR1Q8N653 840 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 ELMO3Q96BJ8 720 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 PDGFDQ9GZP0 370 aaPredicted RBP14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 NAA20P61599 178 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 NRG1Q02297 640 aaPredicted RBP14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 PNLDC1Q8NA58 520 aaKnown RBP14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 NXNL1Q96CM4 212 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 ZSWIM3Q96MP5 696 aa14.56□□□□□ -0.08
SPTLC2-201ENST00000216484 ENTPD5O75356 428 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms