RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 TEAD1P28347 426 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 VAC14Q08AM6 782 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 GALNT3Q14435 633 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 LLGL1Q15334 1064 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 QPCTQ16769 361 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 MAP9Q49MG5 647 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 KDELC2Q7Z4H8 507 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 MAP7D3Q8IWC1 876 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 HDAC11Q96DB2 347 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 OR2M4Q96R27 311 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 ARFGAP3Q9NP61 516 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 ABHD10Q9NUJ1 306 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 FOXJ2Q9P0K8 574 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 CNOT6Q9ULM6 557 aaKnown RBP22.01■■□□□ 1.11
VTI1B-201ENST00000216456 PRAMEF33A0A0G2JMD5 474 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 RHPN2P1A8MT19 583 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 FADS2P1A8MWK0 482 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 PRAMEF10O60809 474 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 PIRTP0C851 137 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 JMJD7P0C870 316 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 MAN1A1P33908 653 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 MAPK10P53779 464 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 CFHR1Q03591 330 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 LY6DQ14210 128 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 PYCR3Q53H96 274 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 ZNF648Q5T619 568 aaPredicted RBP22■■□□□ 1.11
VTI1B-201ENST00000216456 ZFAND4Q86XD8 727 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 VSTM4Q8IW00 320 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 ZNF843Q8N446 348 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 PMEPA1Q969W9 287 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 RNF25Q96BH1 459 aaPredicted RBP22■■□□□ 1.11
VTI1B-201ENST00000216456 EID2BQ96D98 161 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 SCARF2Q96GP6 870 aaPredicted RBP22■■□□□ 1.11
VTI1B-201ENST00000216456 COX14Q96I36 57 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 NHEJ1Q9H9Q4 299 aaPredicted RBP22■■□□□ 1.11
VTI1B-201ENST00000216456 KCTD5Q9NXV2 234 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 TMEM9Q9P0T7 183 aa22■■□□□ 1.11
VTI1B-201ENST00000216456 SCN8AQ9UQD0 1980 aa21.99■■□□□ 1.11
VTI1B-201ENST00000216456 C1orf232A0A0U1RR37 186 aa21.99■■□□□ 1.11
VTI1B-201ENST00000216456 SSU72P8A0A1W2PR75 194 aa21.99■■□□□ 1.11
VTI1B-201ENST00000216456 ZIC2O95409 532 aaPredicted RBP21.99■■□□□ 1.11
VTI1B-201ENST00000216456 ASMTLO95671 621 aa21.99■■□□□ 1.11
VTI1B-201ENST00000216456 CCL4P13236 92 aa21.99■■□□□ 1.11
VTI1B-201ENST00000216456 ZNF30P17039 623 aa21.99■■□□□ 1.11
VTI1B-201ENST00000216456 CD1CP29017 333 aa21.99■■□□□ 1.11
VTI1B-201ENST00000216456 UCNP55089 124 aa21.99■■□□□ 1.11
VTI1B-201ENST00000216456 DYNLT1P63172 113 aa21.99■■□□□ 1.11
VTI1B-201ENST00000216456 PPIDQ08752 370 aaKnown RBP21.99■■□□□ 1.11
VTI1B-201ENST00000216456 TAF1BQ53T94 588 aaPredicted RBP21.99■■□□□ 1.11
VTI1B-201ENST00000216456 ZNF438Q7Z4V0 828 aa21.99■■□□□ 1.11
VTI1B-201ENST00000216456 NDUFAF2Q8N183 169 aa21.99■■□□□ 1.11
VTI1B-201ENST00000216456 TTC9Q92623 222 aa21.99■■□□□ 1.11
VTI1B-201ENST00000216456 USP7Q93009 1102 aa21.99■■□□□ 1.11
VTI1B-201ENST00000216456 FATE1Q969F0 183 aa21.99■■□□□ 1.11
VTI1B-201ENST00000216456 SEPT10Q9P0V9 454 aa21.99■■□□□ 1.11
VTI1B-201ENST00000216456 K7ENP7 123 aa21.98■■□□□ 1.11
VTI1B-201ENST00000216456 MFAP3LO75121 409 aa21.98■■□□□ 1.11
VTI1B-201ENST00000216456 MX2P20592 715 aa21.98■■□□□ 1.11
VTI1B-201ENST00000216456 CSF2RBP32927 897 aa21.98■■□□□ 1.11
VTI1B-201ENST00000216456 NOP2P46087 812 aaKnown RBP21.98■■□□□ 1.11
VTI1B-201ENST00000216456 AP1B1Q10567 949 aa21.98■■□□□ 1.11
VTI1B-201ENST00000216456 EIF3IQ13347 325 aaKnown RBP21.98■■□□□ 1.11
VTI1B-201ENST00000216456 SLC9A4Q6AI14 798 aa21.98■■□□□ 1.11
VTI1B-201ENST00000216456 INO80CQ6PI98 192 aaPredicted RBP21.98■■□□□ 1.11
VTI1B-201ENST00000216456 ZNF765Q7L2R6 523 aa21.98■■□□□ 1.11
VTI1B-201ENST00000216456 LYSMD3Q7Z3D4 306 aa21.98■■□□□ 1.11
VTI1B-201ENST00000216456 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.98■■□□□ 1.11
VTI1B-201ENST00000216456 PCDHGA7Q9Y5G6 932 aa21.98■■□□□ 1.11
VTI1B-201ENST00000216456 IGHV5-10-1A0A0J9YXX1 117 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 C9orf172C9J069 976 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 TMX2-CTNND1H3BSU7 103 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 DNAJC6O75061 913 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 CPNE6O95741 557 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 SLC4A1P02730 911 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 KRT1P04264 644 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 TPM3P06753 285 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 MLLT3P42568 568 aaPredicted RBP21.97■■□□□ 1.11
VTI1B-201ENST00000216456 SPINT3P49223 89 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 C19orf57Q0VDD7 668 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 NR1D2Q14995 579 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 CCDC81Q6ZN84 652 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 VASH2Q86V25 355 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 PIM3Q86V86 326 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 EXD1Q8NHP7 514 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 CCDC74BQ96LY2 380 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 AGAP3Q96P47 875 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 CDH19Q9H159 772 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 GOLPH3Q9H4A6 298 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 SAE1Q9UBE0 346 aaPredicted RBP21.97■■□□□ 1.11
VTI1B-201ENST00000216456 AMACRQ9UHK6 382 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 ZNHIT2Q9UHR6 403 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 TFR2Q9UP52 801 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 SHOC2Q9UQ13 582 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 AHCTF1Q8WYP5 2266 aa21.97■■□□□ 1.11
VTI1B-201ENST00000216456 ANKRD66B4E2M5 251 aa21.96■■□□□ 1.11
VTI1B-201ENST00000216456 ERVH48-1M5A8F1 160 aa21.96■■□□□ 1.11
VTI1B-201ENST00000216456 TK2O00142 265 aa21.96■■□□□ 1.11
VTI1B-201ENST00000216456 CBFA2T2O43439 604 aa21.96■■□□□ 1.11
VTI1B-201ENST00000216456 CES1P23141 567 aa21.96■■□□□ 1.11
VTI1B-201ENST00000216456 IFI35P80217 286 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms