RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 XAB2Q9HCS7 855 aaKnown RBP11.32□□□□□ -0.6
CDKL1-201ENST00000216378 SIT1Q9Y3P8 196 aa11.32□□□□□ -0.6
CDKL1-201ENST00000216378 SMAD6O43541 496 aaKnown RBP11.31□□□□□ -0.6
CDKL1-201ENST00000216378 RFPL1O75677 317 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 AP2A1O95782 977 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 PIRTP0C851 137 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 MX2P20592 715 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 COL9A1P20849 921 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 PRKCHP24723 683 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 DSC2Q02487 901 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 DMWDQ09019 674 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 DLG2Q15700 870 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 LIN52Q52LA3 116 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 TMEM31Q5JXX7 168 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 AGAP9Q5VTM2 703 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 CES4AQ5XG92 561 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 KCTD11Q693B1 232 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 TMEM92Q6UXU6 159 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 GRAMD2AQ8IUY3 354 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 RIBC1Q8N443 379 aaPredicted RBP11.31□□□□□ -0.6
CDKL1-201ENST00000216378 IL17RCQ8NAC3 791 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 VPS37AQ8NEZ2 397 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 CFAP61Q8NHU2 1237 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 FIBINQ8TAL6 211 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 EXOC2Q96KP1 924 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 ZYG11BQ9C0D3 744 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 SAMD15Q9P1V8 674 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 NOX1Q9Y5S8 564 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 USH1CQ9Y6N9 552 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 A0A1B0GVM2 712 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 TCAF2A6NFQ2 919 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 FAM159BA6NKW6 160 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 MAGEB3O15480 346 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 GPR37L1O60883 481 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 CYBBP04839 570 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 PABPC1P11940 636 aaKnown RBP11.31□□□□□ -0.6
CDKL1-201ENST00000216378 COL6A2P12110 1019 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 BGNP21810 368 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 IL12RB1P42701 662 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 METAP1P53582 386 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 NR1H3Q13133 447 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 SEPT6Q14141 434 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 PTPRRQ15256 657 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 SEPT7Q16181 437 aaKnown RBP11.31□□□□□ -0.6
CDKL1-201ENST00000216378 PLEKHG6Q3KR16 790 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 PITRM1Q5JRX3 1037 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 ZCCHC23Q6ZST2 131 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 CHST9Q7L1S5 443 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 TREML1Q86YW5 311 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 FRMD1Q8N878 549 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 TXNDC5Q8NBS9 432 aaKnown RBP11.31□□□□□ -0.6
CDKL1-201ENST00000216378 MRGPRX3Q96LB0 322 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 FERMT1Q9BQL6 677 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 HGH1Q9BTY7 390 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 C8orf33Q9H7E9 229 aaPredicted RBP11.31□□□□□ -0.6
CDKL1-201ENST00000216378 CATSPERBQ9H7T0 1116 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 TSC22D4Q9Y3Q8 395 aa11.31□□□□□ -0.6
CDKL1-201ENST00000216378 NUMA1Q14980 2115 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 NDC80O14777 642 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 DNAJC6O75061 913 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 CD86P42081 329 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 ARF5P84085 180 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 IL9RQ01113 521 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 PRKCQQ04759 706 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 MGAT5Q09328 741 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 NIPAL4Q0D2K0 466 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 TBL3Q12788 808 aaKnown RBP11.3□□□□□ -0.6
CDKL1-201ENST00000216378 PTPRCAPQ14761 206 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 TTC39BQ5VTQ0 682 aaPredicted RBP11.3□□□□□ -0.6
CDKL1-201ENST00000216378 MBLAC2Q68D91 279 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 SH2D5Q6ZV89 423 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 KIAA0907Q7Z7F0 614 aaPredicted RBP11.3□□□□□ -0.6
CDKL1-201ENST00000216378 MAML2Q8IZL2 1156 aaPredicted RBP11.3□□□□□ -0.6
CDKL1-201ENST00000216378 NDUFAF2Q8N183 169 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 PGBD5Q8N414 524 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 NAT14Q8WUY8 206 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 ZNF75CPQ92670 426 aaPredicted RBP11.3□□□□□ -0.6
CDKL1-201ENST00000216378 ITPKCQ96DU7 683 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 LRFN3Q9BTN0 628 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 SPON2Q9BUD6 331 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 GLOD4Q9HC38 313 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 IARS2Q9NSE4 1012 aaKnown RBP11.3□□□□□ -0.6
CDKL1-201ENST00000216378 MOCS1Q9NZB8 636 aa11.3□□□□□ -0.6
CDKL1-201ENST00000216378 ZFHX2Q9C0A1 2572 aaPredicted RBP11.3□□□□□ -0.6
CDKL1-201ENST00000216378 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.29□□□□□ -0.6
CDKL1-201ENST00000216378 IQANK1A0A1B0GTG1 560 aa11.29□□□□□ -0.6
CDKL1-201ENST00000216378 A0A1W2PQ67 120 aa11.29□□□□□ -0.6
CDKL1-201ENST00000216378 TPP1O14773 563 aa11.29□□□□□ -0.6
CDKL1-201ENST00000216378 MUSKO15146 869 aa11.29□□□□□ -0.6
CDKL1-201ENST00000216378 PRPF4O43172 522 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDKL1-201ENST00000216378 UBOX5O94941 541 aa11.29□□□□□ -0.6
CDKL1-201ENST00000216378 CPA3P15088 417 aa11.29□□□□□ -0.6
CDKL1-201ENST00000216378 AOC1P19801 751 aa11.29□□□□□ -0.6
CDKL1-201ENST00000216378 GRIA2P42262 883 aa11.29□□□□□ -0.6
CDKL1-201ENST00000216378 CDH4P55283 916 aa11.29□□□□□ -0.6
CDKL1-201ENST00000216378 GRSF1Q12849 480 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDKL1-201ENST00000216378 ZNF177Q13360 481 aaPredicted RBP11.29□□□□□ -0.6
CDKL1-201ENST00000216378 RABGAP1LQ5R372 815 aa11.29□□□□□ -0.6
CDKL1-201ENST00000216378 MPP7Q5T2T1 576 aa11.29□□□□□ -0.6
CDKL1-201ENST00000216378 SPATA24Q86W54 205 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms