RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 OR10H3O60404 316 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 UGT2B15P54855 530 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 PCID2Q5JVF3 399 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 TPRG1LQ5T0D9 272 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 IL23RQ5VWK5 629 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 BBS12Q6ZW61 710 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 FAM71AQ8IYT1 594 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 TOR1AIP2Q8NFQ8 470 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 PPP1R14AQ96A00 147 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 TMEM246Q9BRR3 403 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.42□□□□□ -0.74
VCL-201ENST00000211998 MALT1Q9UDY8 824 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 FAM47E-STBD1D6RA91 191 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 EI24O14681 340 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 OR5F1O95221 314 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 NFICP08651 508 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 PABPC4LP0CB38 370 aaKnown RBP10.42□□□□□ -0.74
VCL-201ENST00000211998 FAUP35544 74 aaKnown RBP10.42□□□□□ -0.74
VCL-201ENST00000211998 SLC15A1P46059 708 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 NDST1P52848 882 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 SLC12A3P55017 1021 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 STARD3Q14849 445 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 ARSHQ5FYA8 562 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 CPSF7Q8N684 471 aaKnown RBP10.42□□□□□ -0.74
VCL-201ENST00000211998 LRRC57Q8N9N7 239 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 STARD8Q92502 1023 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 EBF4Q9BQW3 602 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 SNTG1Q9NSN8 517 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 FAM50BQ9Y247 325 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 SH3BGRLO75368 114 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 MLYCDO95822 493 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 ACADMP11310 421 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 PTPN3P26045 913 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 OCLNQ16625 522 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 BTBD16Q32M84 506 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 ADGRA1Q86SQ6 560 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 SLC7A5P1Q8MH63 180 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 TMEM86AQ8N2M4 240 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 CLIP4Q8N3C7 705 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 BANPQ8N9N5 519 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 CLHC1Q8NHS4 586 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 ADAM32Q8TC27 787 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 LRRN4Q8WUT4 740 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 PPP3R2Q96LZ3 170 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 VAT1Q99536 393 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 MED11Q9P086 117 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 TRPV2Q9Y5S1 764 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 PAPSS1O43252 624 aaPredicted RBP10.41□□□□□ -0.74
VCL-201ENST00000211998 OR7A10O76100 309 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 GPD2P43304 727 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 GDI2P50395 445 aaKnown RBP10.41□□□□□ -0.74
VCL-201ENST00000211998 SEMA3AQ14563 771 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 DLG2Q15700 870 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 LY6KQ17RY6 165 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 INSCQ1MX18 579 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 SEC14L1Q92503 715 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 PPM1MQ96MI6 270 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 HERC2P3Q9BVR0 1158 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 CIPCQ9C0C6 399 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 SLC35C2Q9NQQ7 365 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 VPS51Q9UID3 782 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 CYP3A4P08684 503 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 NCK1P16333 377 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 NPR2P20594 1047 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 RPL6Q02878 288 aaKnown RBP10.41□□□□□ -0.74
VCL-201ENST00000211998 GRSF1Q12849 480 aaKnown RBP eCLIP10.41□□□□□ -0.74
VCL-201ENST00000211998 RBM48Q5RL73 367 aaKnown RBP10.41□□□□□ -0.74
VCL-201ENST00000211998 PIK3R6Q5UE93 754 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 OTOP1Q7RTM1 612 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 FAM163AQ96GL9 167 aaPredicted RBP10.41□□□□□ -0.74
VCL-201ENST00000211998 SERAC1Q96JX3 654 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 OR2B2Q9GZK3 357 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 PCDHAC1Q9H158 963 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 DCSTAMPQ9H295 470 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 ALG2Q9H553 416 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 POLE4Q9NR33 117 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 AASSQ9UDR5 926 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 ZNF232Q9UNY5 417 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 SAMD4AQ9UPU9 718 aaKnown RBP10.41□□□□□ -0.74
VCL-201ENST00000211998 AP3D1O14617 1153 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 PLD2O14939 933 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 SUV39H1O43463 412 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 NOBOXO60393 691 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 TCEA3O75764 348 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 AMHP03971 560 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 ZNF182P17025 639 aaPredicted RBP10.41□□□□□ -0.74
VCL-201ENST00000211998 ZNF7P17097 686 aaPredicted RBP10.41□□□□□ -0.74
VCL-201ENST00000211998 SLC7A1P30825 629 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 ALDH3A2P51648 485 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 AP1S2P56377 157 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 MAB21L1Q13394 359 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 IL17AQ16552 155 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 SCUBE3Q8IX30 993 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 ZNF781Q8N8C0 355 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 LPCAT1Q8NF37 534 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 ZNF431Q8TF32 576 aaPredicted RBP10.41□□□□□ -0.74
VCL-201ENST00000211998 HASPINQ8TF76 798 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 DNAJB3Q8WWF6 145 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 GAD1Q99259 594 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 DSN1Q9H410 356 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms