RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 CRISPLD1Q9H336 500 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 TUBA8Q9NY65 449 aaPredicted RBP12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 A6NL46 340 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 CCL16O15467 120 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 PSMD3O43242 534 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 ESRRBO95718 433 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 SMIM18P0DKX4 95 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 RCVRNP35243 200 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 ARPC4P59998 168 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 RAB10P61026 200 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 MYBPC1Q00872 1141 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 DPYSQ14117 519 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 PLPP4Q5VZY2 271 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 GANCQ8TET4 914 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 ARNTL2Q8WYA1 636 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 KCTD13Q8WZ19 329 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 PLEKHA8Q96JA3 519 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 ZNHIT2Q9UHR6 403 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 CD84Q9UIB8 345 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 PCDHB8Q9UN66 801 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 CDC14AQ9UNH5 594 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 PSMD13Q9UNM6 376 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 TMEM98Q9Y2Y6 226 aa12.9□□□□□ -0.34
PCDHB4-201ENST00000194152 MTMR11A4FU01 709 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 C2orf81A6NN90 581 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 E7ESA3 106 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 SCAMP1O15126 338 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 MATN3O15232 486 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 ADAMTS4O75173 837 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 SERPINA6P08185 405 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 LIMK2P53671 638 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 USP41Q3LFD5 358 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 CLDN19Q8N6F1 224 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 SCAIQ8N9R8 606 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 CATSPER1Q8NEC5 780 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 CNDP1Q96KN2 507 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 BTBD9Q96Q07 612 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 CIB1Q99828 191 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 CCDC90BQ9GZT6 254 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 K7ERQ8 282 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 ARVCFO00192 962 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 BOP1Q14137 746 aaKnown RBP12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 MBTPS1Q14703 1052 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 TMC5Q6UXY8 1006 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 CAMK1DQ8IU85 385 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 CEP97Q8IW35 865 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 BORCS5Q969J3 196 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 BTN2A3PQ96KV6 586 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 CCDC138Q96M89 665 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 ATAD3AQ9NVI7 634 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 NSMCE4AQ9NXX6 385 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 PTGDR2Q9Y5Y4 395 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 ATG2BQ96BY7 2078 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 A0A1W2PRU2 124 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 TMX2-CTNND1H3BSU7 103 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 STAU1O95793 577 aaKnown RBP12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 MT-ND1P03886 318 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 LINC00032P0C843 101 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 MAGP20916 626 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 HOXD11P31277 338 aaPredicted RBP12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 GLUD2P49448 558 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 ADAM17P78536 824 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 RALGDSQ12967 914 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 OTUD1Q5VV17 481 aaPredicted RBP12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 GK5Q6ZS86 529 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 SLC35B4Q969S0 331 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 TAMM41Q96BW9 452 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 SLC39A3Q9BRY0 314 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 MARCH4Q9P2E8 410 aaPredicted RBP12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 TRMT6Q9UJA5 497 aaKnown RBP12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 BAG5Q9UL15 447 aa12.89□□□□□ -0.35
PCDHB4-201ENST00000194152 ASCC3Q8N3C0 2202 aaKnown RBP12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 SHROOM3Q8TF72 1996 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 TRIM64CA6NLI5 447 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 SLC38A8A6NNN8 435 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 H7C4K7 107 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 AGRPO00253 132 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 ZBTB14O43829 449 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 MTX2O75431 263 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 MPOP05164 745 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 APOA4P06727 396 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 S100A1P23297 94 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 NKX2-5P52952 324 aaPredicted RBP12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 TBCCQ15814 346 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 FBXW8Q8N3Y1 598 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 SLC2A13Q96QE2 648 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 ACOX2Q99424 681 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 ING2Q9H160 280 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 DDX28Q9NUL7 540 aaKnown RBP12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 LSM7Q9UK45 103 aaKnown RBP12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 AGO1Q9UL18 857 aaKnown RBP12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 MAGEB16A2A368 324 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 HDAC3O15379 428 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 FGF10O15520 208 aaPredicted RBP12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 EPHB3P54753 998 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 EMP3P54852 163 aa12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 FASTKQ14296 549 aaKnown RBP12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 CAPRIN1Q14444 709 aaKnown RBP12.88□□□□□ -0.35
PCDHB4-201ENST00000194152 PGS1Q32NB8 556 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms