RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Pcdhga9Q91XX9 932 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Pcdhga10Q91XY9 930 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Tomm70Q9CZW5 611 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Fam45aQ9D8N2 357 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Vnn3Q9QZ25 500 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gm28363A0A087WQW2 129 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 A0A1L1ST33 502 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ccdc163A2AGD7 326 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Cntnap3E9PY62 1287 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Tsga10ipF7A1F0 157 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Scarf2P59222 833 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ifi47Q61635 420 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Pik3r3Q64143 461 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Scaf4Q6PFF0 1209 aaKnown RBP13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 NoboxQ8VIH1 527 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Rnf138rt1Q9D9M9 248 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Scamp5Q9JKD3 235 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gm10720D3Z1I5 223 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 1600015I10RikE9Q745 711 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Bnc1O35914 961 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Alox5P48999 674 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Dnajb14Q149L6 379 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Mfsd3Q5U419 412 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Atl1Q8BH66 558 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 PstkQ8BP74 359 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Cers6Q8C172 384 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Nae1Q8VBW6 534 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Map3k21Q8VDG6 1002 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Olfr342Q8VGK7 312 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Lgals12Q91VD1 314 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Nhsl1Q8CAF4 1587 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Mup18A2BIM8 181 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Kcnt2D3Z649 1135 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Pabpc4lG5E8X2 370 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gm3755K7N743 167 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Mup11P04938 181 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Cd36Q08857 472 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gm1587Q3UT80 123 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gm21320Q4FZE8 181 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ostm1Q8BGT0 338 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Trappc5Q9CQA1 188 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Slc25a19Q9DAM5 318 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Cpne8Q9DC53 577 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Xlr5bA2BI50 236 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 RerglB2RVE2 204 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Cntn3Q07409 1028 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Uimc1Q5U5Q9 727 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Larp4bQ6A0A2 741 aaKnown RBP13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Zfp120Q8BZW4 436 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 RtknQ8C6B2 564 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Fam126bQ8C729 530 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Far1Q922J9 515 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ist1Q9CX00 362 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 5530400C23RikQ9D3I0 173 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Sae1Q9R1T2 350 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Slc9a3G3X939 829 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ndrg1Q62433 394 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Mapre3Q6PER3 281 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Olfr295Q7TS08 309 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Tm4sf4Q91XD3 202 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Prorsd1Q9D820 169 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Tbc1d21Q9D9D3 336 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Nusap1Q9ERH4 427 aaKnown RBP13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 SmoktcrA2KF29 484 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Fbrsl1E9Q9T0 1031 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Aldh1a7O35945 501 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Rhox5P52651 210 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Fmo3P97501 534 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Larp7Q05CL8 570 aaKnown RBP13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Cd300lgQ1ERP8 331 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Olfml2bQ3V1G4 746 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Rassf5Q5EBH1 413 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Elmo1Q8BPU7 727 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Pcyox1lQ8C7K6 495 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Trem2Q99NH8 227 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Lrrc4Q99PH1 652 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 PompQ9CQT5 141 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Spata1Q9D5R4 444 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Grm3Q9QYS2 879 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Atp6ap1Q9R1Q9 463 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 NadkP58058 439 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 CamkmtQ3U2J5 323 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Sfmbt2Q5DTW2 938 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Sp140Q6NSQ5 534 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Serpinb9dQ8BMT0 377 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Rnf219Q8K2Y0 722 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Eif2b2Q99LD9 351 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Dusp21Q9D9D8 189 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Fbxo17Q9QZM8 286 aa13.8□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Mtnd2P03893 345 aa13.79□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Spp1P10923 294 aaKnown RBP13.79□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Htr3aP23979 487 aa13.79□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 PamP97467 979 aa13.79□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Olfr1355Q7TQU9 310 aa13.79□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Zfyve1Q810J8 777 aa13.79□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Smoc2Q8CD91 447 aa13.79□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Clip4Q8CI96 704 aa13.79□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Bdh2Q8JZV9 245 aa13.79□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gm42417Q8K1D0 126 aa13.79□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gfm2Q8R2Q4 779 aa13.79□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms