RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Ror2Q9Z138 944 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Atp6v1c1Q9Z1G3 382 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 A0A286YCD0 109 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Gm13285B1AYI3 182 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Gm13275B1AYI8 182 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Pot1bH7BX60 640 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Mcpt1P11034 246 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Hcls1P49710 486 aaKnown RBP15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 March9Q3TZ87 348 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Sel1l3Q80TS8 1137 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 R3hcc1lQ8BJM3 775 aaKnown RBP15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 IfnzQ8BQT1 182 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Ttc34Q8C0Q3 554 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Tceal5Q8CCT4 200 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Gm13278Q8CD73 182 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Nae1Q8VBW6 534 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Rabep2Q91WG2 554 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Gpr37l1Q99JG2 481 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Ssxb1Q9CPU1 170 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Tomm20lQ9D4V6 152 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Smad9Q9JIW5 430 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Actl7aQ9QY84 440 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Atp6v1g2Q9WTT4 118 aa15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Rfc2Q9WUK4 349 aaKnown RBP15.84■□□□□ 0.13
Trim39-203ENSMUST00000113706 Dcpp3L7N259 170 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Slc16a1P53986 493 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Msx2Q03358 267 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Pgap2Q3TQR0 254 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Naf1Q3UMQ8 489 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Ankrd34bQ3UUF8 508 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Cage1Q5IR70 849 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Rabl6Q5U3K5 725 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Tmem198Q8BG75 360 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Ppm1lQ8BHN0 360 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Tbc1d14Q8CGA2 694 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Spp2Q8K1I3 203 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Slc6a20aQ8VDB9 592 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Q8VDP2 222 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Hacd2Q9D3B1 254 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Fam90a1bQ9D4F3 419 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Clca1Q9D7Z6 913 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Slc22a17Q9D9E0 401 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Actrt1Q9D9J3 376 aa15.83■□□□□ 0.13
Trim39-203ENSMUST00000113706 Gm10715J3QP74 227 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Atp5jP97450 108 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Itih1Q61702 907 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ints6Q6PCM2 883 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Prkaa2Q8BRK8 552 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ndufs1Q91VD9 727 aaKnown RBP15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Trim8Q99PJ2 551 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Glod4Q9CPV4 298 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Zfp773Q9CZ29 471 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Q9D5Y0 588 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 AcadsbQ9DBL1 432 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Rps6kb2Q9Z1M4 485 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Gm20509G3UZF1 325 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 MaffO54791 156 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Stam2O88811 523 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Camk4P08414 469 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Trim71Q1PSW8 855 aaKnown RBP15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Pcnx4Q3UVY5 1174 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Itga7Q61738 1179 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Atp4aQ64436 1033 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Casc4Q6P2L7 435 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Znf280cQ6P3Y5 742 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Rps27lQ6ZWY3 84 aaKnown RBP15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 MylipQ8BM54 445 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 4921511C20RikQ8BVT7 469 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Wwp1Q8BZZ3 918 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Q8C4P0 716 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Pgm2l1Q8CAA7 621 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Cfap61Q8CEL2 1252 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Psmd8Q9CX56 353 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 4933425L06RikQ9D3Z8 585 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 P2yr13Q9D8I2 337 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 CtsmQ9JL96 333 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Cul3Q9JLV5 768 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Hao2Q9NYQ2 353 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Fiz1Q9WTJ4 500 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Asb3Q9WV72 525 aa15.83■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ncam2O35136 837 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Tcf3P15806 651 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Traf2P39429 501 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Mnat1P51949 309 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Taar7eQ5QD09 358 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Bfsp2Q6NVD9 416 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Rslcan18Q7M6X5 460 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Slc38a9Q8BGD6 560 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 DseQ8BLI4 958 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 B430218F22RikQ8BQR5 223 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Plekhs1Q8BW88 474 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Camk1dQ8BW96 385 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 TdrpQ8C5P7 182 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ephb1Q8CBF3 984 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Zc2hc1cQ8CCG1 527 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Krt5Q922U2 580 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Sgk2Q9QZS5 367 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Gm11758A2BEI6 360 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Gm11757A2BEI8 360 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Prrg1A2BFE8 218 aa15.82■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms