RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Pag1Q3U1F9 429 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Serac1Q3U213 654 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Kpna1Q60960 538 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 DazlQ64368 298 aaKnown RBP18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Casc4Q6P2L7 435 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Fbxl21Q8BFZ4 434 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Mterf2Q8BKY8 385 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Ttc24Q8BYG0 334 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Ccdc90bQ8C3X2 256 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Gsdmc3Q8CB12 480 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Ttc39cQ8VE09 580 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Snrpb2Q9CQI7 225 aaKnown RBP18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Q9D9D9 101 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Smim23Q9DAL0 136 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Ampd2Q9DBT5 798 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Plscr1Q9JJ00 328 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Cngb3Q9JJZ9 694 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Clec1bQ9JL99 229 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Gbf1Q6DFZ1 1861 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Gm6509A0A0J9YUV1 481 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gm8113E0CXS8 587 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Zscan4bE9Q3G0 505 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 C6E9Q6D8 931 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gm6351K9J7D1 481 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Cd151O35566 253 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Cldn5O54942 218 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Sult1e1P49891 295 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ephb3P54754 993 aaKnown RBP18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 CkbQ04447 381 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Dnajb14Q149L6 379 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Akap14Q3V0I7 536 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Fam160a1Q505K2 1081 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Klhl23Q6GQU2 558 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gpbp1l1Q6NZP2 473 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ssxb3Q6XAS4 170 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Samd4bQ80XS6 687 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Fam83eQ80XS7 481 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 DseQ8BLI4 958 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Csnk1g1Q8BTH8 459 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Mark1Q8VHJ5 795 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Pcdhb11Q91UZ8 797 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Rab30Q923S9 203 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Tnip2Q99JG7 430 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Mrpl9Q99N94 265 aaKnown RBP18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Atad1Q9D5T0 361 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Pak1ip1Q9DCE5 382 aaKnown RBP18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Rhox9Q9EQM5 227 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gprc5dQ9JIL6 344 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Clcn5Q9WVD4 746 aa18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 VarsQ9Z1Q9 1263 aaKnown RBP18.27■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gm5751A2AHC8 147 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 Zmynd12A2BGJ5 363 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ssxb8B1AY40 170 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 Vmn2r27D3YUK6 857 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 Stam2O88811 523 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 P01631 113 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 Casp2P29594 452 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 Prox1P48437 737 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 Sec1P97353 368 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 Larp7Q05CL8 570 aaKnown RBP18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 Foxred2Q3USW5 665 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 B020004J07RikQ3UTC0 476 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 StgQ8BM15 349 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 OsgepQ8BWU5 335 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gin1Q8K259 518 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 Cdyl2Q9D5D8 503 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 Stk19Q9JHN8 254 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 Sh3glb1Q9JK48 365 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 Hao2Q9NYQ2 353 aa18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 Keap1Q9Z2X8 624 aaKnown RBP18.26■□□□□ 0.51
Trim47-202ENSMUST00000106441 Srp72F8VQC1 671 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 CenpaO35216 134 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Fpr-rs3O88537 343 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 P01669 111 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ptpn1P35821 432 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Tial1P70318 392 aaKnown RBP18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 P2rx3Q3UR32 397 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 MafkQ61827 156 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Fnip1Q68FD7 1165 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Zfp512bQ6PHP4 879 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Fam120bQ6RI63 786 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Olfr1415Q7TQS4 311 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Olfr1062Q7TR71 315 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Sik2Q8CFH6 931 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 TwnkQ8CIW5 685 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Traf3ip2Q8N7N6 555 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Slc5a9Q8VDT1 685 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Olfr1416Q8VGU4 312 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Rad51cQ924H5 366 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Rpl34Q9D1R9 117 aaKnown RBP18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Rgs1Q9JL25 209 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Rnf11Q9QYK7 154 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Tbk1Q9WUN2 729 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Irs2P81122 1321 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gm3642K7N6V4 267 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Vmn2r46L7N282 809 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 MrasO08989 208 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Hcn4O70507 1186 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ifrd1P19182 449 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 SykP48025 629 aa18.25■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms