RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 GhitmQ91VC9 346 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Smim11aQ99J19 55 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Armc1Q9D7A8 282 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Efhd2Q9D8Y0 240 aaKnown RBP8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 RetnlaQ9EP95 111 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Plod3Q9R0E1 741 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Map3k6Q9WTR2 1291 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Gm11756A2BEJ1 356 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Krt28A6BLY7 462 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Gm13128L7MU96 475 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Dpysl2O08553 572 aaKnown RBP8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 GzmkO35205 263 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Mybpc3O70468 1270 aaKnown RBP8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Fgf18O89101 207 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Serpina3kP07759 418 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Defa8P50706 81 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 NrlP54846 237 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Fam83hQ148V8 1209 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Tmem247Q497K7 211 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Lrrc47Q505F5 581 aaKnown RBP8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Slc5a10Q5SWY8 596 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Khdrbs1Q60749 443 aaKnown RBP8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Laptm5Q61168 261 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Pcbp2Q61990 362 aaKnown RBP8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 EfsQ64355 560 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Magee1Q6PCZ4 918 aaKnown RBP8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Plekha6Q7TQG1 1173 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Olfr23Q7TRX4 325 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Fnip2Q80TD3 1108 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Tex13c3Q810P0 219 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Cxcr1Q810W6 351 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Fbxw21Q8BI38 468 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Msantd1Q8BIL2 278 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Brat1Q8C3R1 822 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 TwnkQ8CIW5 685 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 HpdlQ8K248 371 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Vmn1r185Q8R299 319 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Exd2Q8VEG4 650 aaKnown RBP8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Dlg2Q91XM9 852 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 L2hgdhQ91YP0 464 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 BniplQ99JU7 328 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 NamptQ99KQ4 491 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Itfg1Q99KW9 610 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Ankrd61Q9CQM6 421 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Ints12Q9D168 461 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Creb3l4Q9D2A5 370 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 P2yr13Q9D8I2 337 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Uba7Q9DBK7 977 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Osbpl3Q9DBS9 855 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Htra1Q9R118 480 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Tubd1Q9R1K7 455 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Cyb561d2Q9WUE3 222 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Trbv4A0A075B5I2 113 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Ankrd34aB2RW11 495 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Gm10719E9Q7T3 227 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Zbtb10E9Q8X5 861 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Gm10721J3QPJ9 223 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Rhox2gL7MUB9 191 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Hk2O08528 917 aaKnown RBP8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Acot1O55137 419 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Mthfd2P18155 350 aaKnown RBP8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Cap1P40124 474 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Pdcd5P56812 126 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Rab10P61027 200 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 SiaeP70665 541 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 OxtrP97926 388 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Rnf157Q3TEL6 685 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 TfptQ3U1J1 259 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Zfp868Q3UTQ6 422 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Chsy3Q5DTK1 884 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Papd5Q68ED3 633 aaKnown RBP8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Prrt3Q6PE13 971 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Prox2Q8BII1 593 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 DseQ8BLI4 958 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 EmsyQ8BMB0 1264 aaKnown RBP8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Tp53bp2Q8CG79 1128 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Pitrm1Q8K411 1036 aaKnown RBP8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Oas3Q8VI93 1138 aaKnown RBP8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Pih1d1Q9CQJ2 290 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Acot13Q9CQR4 140 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Tpd52l2Q9CYZ2 220 aaKnown RBP8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Zfp655Q9CZP3 541 aaKnown RBP8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 4933425L06RikQ9D3Z8 585 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Cyp4v2Q9DBW0 525 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Dcaf6Q9DC22 876 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Ntn4Q9JI33 628 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Slc7a8Q9QXW9 531 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 DgkeQ9R1C6 564 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Asb4Q9WV71 426 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Arid2E9Q7E2 1828 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 SelenonD3Z2R5 557 aa8.25□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Vmn2r74E9PW21 853 aa8.25□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Fbxl18E9PYR1 771 aa8.25□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Gm21738J3QP72 227 aa8.25□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Vmn2r46L7N282 809 aa8.25□□□□□ -1.09
Cdc40-201ENSMUST00000044166 ClockO08785 855 aa8.25□□□□□ -1.09
Cdc40-201ENSMUST00000044166 LatO54957 242 aa8.25□□□□□ -1.09
Cdc40-201ENSMUST00000044166 P01650 108 aa8.25□□□□□ -1.09
Cdc40-201ENSMUST00000044166 P01653 108 aa8.25□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Mup5P11591 180 aa8.25□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms