RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 RpainQ9CWY9 219 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Rabl3Q9D4V7 236 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Efcab9Q9DAM2 216 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Cacna1bO55017 2327 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Anapc1P53995 1944 aaKnown RBP11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Gm15821A6X8J8 139 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Zbed5B2RPU8 756 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Lekr1B2RVN1 116 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Ptar1E9QAB6 424 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Susd5G3UW60 619 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Exoc7O35250 697 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Enc1O35709 589 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Ldb2O55203 373 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Dnmt3aO88508 908 aaKnown RBP11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 P01636 108 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Mtnd3P03899 115 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Spp1P10923 294 aaKnown RBP11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Anxa6P14824 673 aaKnown RBP11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 MsnP26041 577 aaKnown RBP11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Wnt3aP27467 352 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 GlaP51569 419 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Tbx4P70325 552 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Ptprn2P80560 1001 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 NptnP97300 397 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Hoxc4Q08624 264 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 1700061G19RikQ08EE8 705 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 GiprQ0P543 460 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Srsf6Q3TWW8 339 aaKnown RBP11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Ccdc114Q3UX62 658 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Zfp235Q499D5 702 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Gzf1Q4VBD9 706 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 TfrcQ62351 763 aaKnown RBP11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Sf1Q64213 653 aaKnown RBP11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Muc19Q6JHY2 733 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 AmphQ7TQF7 686 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Mtmr12Q80TA6 747 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Tmem184bQ8BG09 407 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Fsd1lQ8BYN5 507 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Pias2Q8C5D8 621 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 H6pdQ8CFX1 789 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Acad10Q8K370 1069 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Mrps18cQ8R2L5 143 aaKnown RBP11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 VitQ8VHI5 650 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Senp2Q91ZX6 588 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Ubxn1Q922Y1 297 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Dhx58Q99J87 678 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Dhrs1Q99L04 313 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Acot13Q9CQR4 140 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Q9D112 206 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Creb3l4Q9D2A5 370 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Polr3cQ9D483 533 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Dgat2Q9DCV3 388 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Pias4Q9JM05 507 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Cyp3a41aQ9JMA7 504 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Rai2Q9QVY8 529 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Vnn3Q9QZ25 500 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Cldn7Q9Z261 211 aa11.31□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Frem2Q6NVD0 3160 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Trbv4A0A075B5I2 113 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Gm45140A0A0N4SUM8 220 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Fbxl18E9PYR1 771 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Serpina3kP07759 418 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Egr1P08046 533 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Sod1P08228 154 aaKnown RBP11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Gstm1P10649 218 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 FshrP35378 692 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Prdx1P35700 199 aaKnown RBP11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Sstr4P49660 385 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Defa-rs7P50715 91 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Eif2ak2Q03963 515 aaKnown RBP11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Nell1Q2VWQ2 810 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Pdss1Q33DR2 409 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Q3TTL0 348 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Fam105aQ3TVP5 353 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Togaram2Q3TYG6 1002 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Zfp36l3Q5ISE2 725 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Hsd3b5Q61694 373 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Tspyl5Q69ZB3 406 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Dusp23Q6NT99 150 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 TxlnaQ6PAM1 554 aaKnown RBP11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Ubfd1Q78JW9 368 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Deup1Q7M6Y5 601 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 IpmkQ7TT16 396 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Itln1bQ80ZA0 313 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Trmt12Q8BG71 446 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Dupd1Q8BK84 215 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 L3mbtl3Q8BLB7 883 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Npsr1Q8BZP8 371 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Washc5Q8C2E7 1159 aaKnown RBP11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 BfarQ8R079 450 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Sec63Q8VHE0 760 aaKnown RBP11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 PlvapQ91VC4 438 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Aim2Q91VJ1 354 aaKnown RBP11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 KlbQ99N32 1043 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Lcn9Q9D267 178 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 4930449I24RikQ9D5E3 319 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Nsmce1Q9D720 266 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Spata9Q9D9R3 252 aa11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 PlekQ9JHK5 350 aaKnown RBP11.3□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Tlr4Q9QUK6 835 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms