RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Sec16bQ91XT4 1051 aa20.35■□□□□ 0.85
Trim47-201ENSMUST00000021120 Reep3Q99KK1 254 aa20.35■□□□□ 0.85
Trim47-201ENSMUST00000021120 Lsm12Q9D0R8 195 aa20.35■□□□□ 0.85
Trim47-201ENSMUST00000021120 MkksQ9JI70 570 aa20.35■□□□□ 0.85
Trim47-201ENSMUST00000021120 Apobec2Q9WV35 224 aa20.35■□□□□ 0.85
Trim47-201ENSMUST00000021120 AadatQ9WVM8 425 aa20.35■□□□□ 0.85
Trim47-201ENSMUST00000021120 Lrrc23O35125 340 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Aff2O55112 1272 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 MaptP10637 733 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 PfklP12382 780 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Ckmt1P30275 418 aaKnown RBP20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Cxcl12P40224 93 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Q32M26 199 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Fzd6Q61089 709 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Tmem151aQ6GQT5 468 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Kctd13Q8BGV7 329 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Rap2cQ8BU31 183 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Anapc2Q8BZQ7 837 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Slc35b4Q8CIA5 331 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Adam33Q923W9 797 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Psmd9Q9CR00 222 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Anks3Q9CZK6 655 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Prkag1O54950 330 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Sp1O89090 784 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Scd1P13516 355 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Ptpn22P29352 802 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 LmnaP48678 665 aaKnown RBP20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Krt6aP50446 553 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Ddx6P54823 483 aaKnown RBP20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Rps24P62849 133 aaKnown RBP20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Zfp217Q3U0X6 1041 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Pitpnm3Q3UHE1 974 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 P2rx3Q3UR32 397 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Runx3Q64131 409 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Olfr295Q7TS08 309 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Zbtb41Q811F1 908 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Bhlhe22Q8C6A8 355 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Brd8Q8R3B7 951 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Nup85Q8R480 656 aaKnown RBP20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Arl2Q9D0J4 184 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Fam227bQ9D518 532 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Fzd2Q9JIP6 570 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Chrna6Q9R0W9 494 aa20.34■□□□□ 0.85
Trim47-201ENSMUST00000021120 Gm7942L7N277 499 aa20.33■□□□□ 0.85
Trim47-201ENSMUST00000021120 Cyp2j6O54750 501 aa20.33■□□□□ 0.85
Trim47-201ENSMUST00000021120 Aldh3a1P47739 453 aa20.33■□□□□ 0.85
Trim47-201ENSMUST00000021120 Itga4Q00651 1039 aa20.33■□□□□ 0.85
Trim47-201ENSMUST00000021120 Grm5Q3UVX5 1203 aa20.33■□□□□ 0.85
Trim47-201ENSMUST00000021120 Fam160a1Q505K2 1081 aa20.33■□□□□ 0.85
Trim47-201ENSMUST00000021120 Afap1l1Q8BZI0 768 aa20.33■□□□□ 0.85
Trim47-201ENSMUST00000021120 Sike1Q9CPR7 207 aa20.33■□□□□ 0.85
Trim47-201ENSMUST00000021120 Q9D937 123 aaKnown RBP20.33■□□□□ 0.85
Trim47-201ENSMUST00000021120 Fiz1Q9WTJ4 500 aa20.33■□□□□ 0.85
Trim47-201ENSMUST00000021120 Asb3Q9WV72 525 aa20.33■□□□□ 0.85
Trim47-201ENSMUST00000021120 Slfn2Q9Z0I6 378 aa20.33■□□□□ 0.85
Trim47-201ENSMUST00000021120 Vmn2r44L7N2E1 861 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Cldn2O88552 230 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 H2-Eb1P04230 264 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Hk1P17710 974 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Vps4bP46467 444 aaKnown RBP20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Csrp3P50462 194 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Ndst2P52850 883 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Acot8P58137 320 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Lsg1Q3UM18 644 aaKnown RBP20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Heatr9Q5QNV8 569 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Clec4a4Q5YIR8 236 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 HiraQ61666 1015 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Ssr4Q62186 172 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Nqo1Q64669 274 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Exoc3l4Q6DIA2 721 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Rmdn2Q8BSE0 410 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Ubr7Q8BU04 425 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Usp43Q8BUM9 1132 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Clptm1lQ8BXA5 539 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Tgif2Q8C0Y1 237 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Pcyox1lQ8C7K6 495 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Fnbp1lQ8K012 605 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Rwdd4Q9CPR1 188 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Mrpl17Q9D8P4 176 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 NvlQ9DBY8 855 aaKnown RBP20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Hmgn3Q9DCB1 99 aa20.33■□□□□ 0.84
Trim47-201ENSMUST00000021120 Klhl32A2AJX0 620 aa20.32■□□□□ 0.84
Trim47-201ENSMUST00000021120 GmlE9PX31 176 aa20.32■□□□□ 0.84
Trim47-201ENSMUST00000021120 Vmn1r176G3UW31 304 aa20.32■□□□□ 0.84
Trim47-201ENSMUST00000021120 Top3aO70157 1003 aa20.32■□□□□ 0.84
Trim47-201ENSMUST00000021120 Pknox1O70477 436 aa20.32■□□□□ 0.84
Trim47-201ENSMUST00000021120 JundP15066 341 aa20.32■□□□□ 0.84
Trim47-201ENSMUST00000021120 Mapkapk2P49138 386 aa20.32■□□□□ 0.84
Trim47-201ENSMUST00000021120 Dact3Q0PHV7 610 aa20.32■□□□□ 0.84
Trim47-201ENSMUST00000021120 Naaladl1Q7M758 745 aa20.32■□□□□ 0.84
Trim47-201ENSMUST00000021120 Wdr91Q7TMQ7 748 aa20.32■□□□□ 0.84
Trim47-201ENSMUST00000021120 Mtrf1Q8K126 446 aa20.32■□□□□ 0.84
Trim47-201ENSMUST00000021120 Gsg1Q8R1W2 324 aa20.32■□□□□ 0.84
Trim47-201ENSMUST00000021120 Upk1aQ9D132 257 aa20.32■□□□□ 0.84
Trim47-201ENSMUST00000021120 Mfsd10Q9D2V8 456 aaKnown RBP20.32■□□□□ 0.84
Trim47-201ENSMUST00000021120 Adam23Q9R1V7 829 aa20.32■□□□□ 0.84
Trim47-201ENSMUST00000021120 Shcbp1Q9Z179 668 aa20.32■□□□□ 0.84
Trim47-201ENSMUST00000021120 Szt2A2A9C3 3431 aa20.31■□□□□ 0.84
Trim47-201ENSMUST00000021120 Pde9aO70628 534 aa20.31■□□□□ 0.84
Trim47-201ENSMUST00000021120 TyrP11344 533 aa20.31■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms