RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 CD248Q9HCU0 757 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 CHRAC1Q9NRG0 131 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 ZDHHC18Q9NUE0 388 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 NLE1Q9NVX2 485 aaPredicted RBP12.93□□□□□ -0.34
PHGDH-218ENST00000641491 C2orf42Q9NWW7 574 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 ZSCAN32Q9NX65 697 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 NSMCE4AQ9NXX6 385 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 WSB2Q9NYS7 404 aaPredicted RBP12.93□□□□□ -0.34
PHGDH-218ENST00000641491 CD84Q9UIB8 345 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 GGT7Q9UJ14 662 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 RIMKLBQ9ULI2 386 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 INVSQ9Y283 1065 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 VPS9D1Q9Y2B5 631 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.93□□□□□ -0.34
PHGDH-218ENST00000641491 CFAP99D6REC4 459 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 RECQL5O94762 991 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-218ENST00000641491 PRAMEF1O95521 474 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 C1SP09871 688 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 TSHRP16473 764 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 HNRNPA2B1P22626 353 aaKnown RBP12.92□□□□□ -0.34
PHGDH-218ENST00000641491 LHCGRP22888 699 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 AKT1P31749 480 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 MC4RP32245 332 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 MAGEA3P43357 314 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 SPINT3P49223 89 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 CCR5P51681 352 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 ZNF140P52738 457 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-218ENST00000641491 IFFO1Q0D2I5 559 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 GTF2H3Q13889 308 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 IHHQ14623 411 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 STAT4Q14765 748 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 CRYMQ14894 314 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 MAP7D1Q3KQU3 841 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 ANKRD20A4Q4UJ75 823 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 LYPLAL1Q5VWZ2 237 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 PRR23BQ6ZRT6 265 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 TAOK1Q7L7X3 1001 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 TMC3Q7Z5M5 1100 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 MPP5Q8N3R9 675 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 CADM4Q8NFZ8 388 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 OR13C4Q8NGS5 318 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 KLK6Q92876 244 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 DTD2Q96FN9 168 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 DCUN1D1Q96GG9 259 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 C9orf72Q96LT7 481 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 PWWP2AQ96N64 755 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 MIR1-1HGQ9H1L0 117 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 AASDHPPTQ9NRN7 309 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 CATSPERZQ9NTU4 200 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 ZFATQ9P243 1243 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 DMTF1Q9Y222 760 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 COQ6Q9Y2Z9 468 aa12.92□□□□□ -0.34
PHGDH-218ENST00000641491 A0A087WUV0 522 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-218ENST00000641491 E7ESA3 106 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 CACNB4O00305 520 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-218ENST00000641491 SLC31A1O15431 190 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 MAGEC1O60732 1142 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 BANF1O75531 89 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 VAPBO95292 243 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 ACSL3O95573 720 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 IVLP07476 585 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 GNSP15586 552 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 HTR1BP28222 390 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 DPP6P42658 865 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 DHPSP49366 369 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-218ENST00000641491 DCDC1P59894 354 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 PTSQ03393 145 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 CACNG1Q06432 222 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 RALGDSQ12967 914 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 KLHL38Q2WGJ6 581 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 RNF187Q5TA31 235 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-218ENST00000641491 SEL1L3Q68CR1 1132 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 KIAA0930Q6ICG6 404 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-218ENST00000641491 CES3Q6UWW8 571 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 C3orf62Q6ZUJ4 267 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 ZNF765Q7L2R6 523 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 CYP2U1Q7Z449 544 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 HSD11B1LQ7Z5J1 315 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 KCNMB4Q86W47 210 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 PHYKPLQ8IUZ5 450 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 CTAGE3PQ8IX95 158 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 LMNTD2Q8IXW0 634 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 CBARPQ8N350 705 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-218ENST00000641491 TTC30BQ8N4P2 665 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 TRAM1L1Q8N609 369 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 DENND6BQ8NEG7 585 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 GAB3Q8WWW8 586 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 HDAC10Q969S8 669 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 SERAC1Q96JX3 654 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 SIGLEC10Q96LC7 697 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 HSPA12BQ96MM6 686 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 SMIM14Q96QK8 99 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 C19orf43Q9BQ61 176 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 CCDC68Q9H2F9 335 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 ASB8Q9H765 288 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 WDR26Q9H7D7 661 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 PHPT1Q9NRX4 125 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-218ENST00000641491 IL17CQ9P0M4 197 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 FKBPLQ9UIM3 349 aa12.91□□□□□ -0.34
PHGDH-218ENST00000641491 PCDHGA2Q9Y5H1 932 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms