RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 RAG1P15918 1043 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 PKNOX1P55347 436 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 SH3BP2P78314 561 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 MRPS35P82673 323 aaKnown RBP17.01■□□□□ 0.31
PHGDH-211ENST00000641213 TRAF2Q12933 501 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 CDC16Q13042 620 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 CEACAM7Q14002 265 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 IKBKEQ14164 716 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 PFKFB4Q16877 469 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 SPOUT1Q5T280 376 aaKnown RBP17.01■□□□□ 0.31
PHGDH-211ENST00000641213 TMEM150AQ86TG1 271 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 UCMAQ8WVF2 138 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 USP13Q92995 863 aaPredicted RBP17.01■□□□□ 0.31
PHGDH-211ENST00000641213 MIEF2Q96C03 454 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 ZFRQ96KR1 1074 aaKnown RBP17.01■□□□□ 0.31
PHGDH-211ENST00000641213 CYP2S1Q96SQ9 504 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 ADGRE3Q9BY15 652 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 DERL2Q9GZP9 239 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 CCDC68Q9H2F9 335 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 LTBP2Q14767 1821 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 LRRC14BA6NHZ5 514 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 STX16-NPEPL1H3BU86 382 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 SCAMP3O14828 347 aaKnown RBP17.01■□□□□ 0.31
PHGDH-211ENST00000641213 TBL1XO60907 577 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 GPC4O75487 556 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 CDK14O94921 469 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 MBL2P11226 248 aaPredicted RBP17.01■□□□□ 0.31
PHGDH-211ENST00000641213 XRCC1P18887 633 aaPredicted RBP17.01■□□□□ 0.31
PHGDH-211ENST00000641213 MZF1P28698 734 aaPredicted RBP17.01■□□□□ 0.31
PHGDH-211ENST00000641213 PPP3CCP48454 512 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 TWF1Q12792 350 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 PTK2BQ14289 1009 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 VEPH1Q14D04 833 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 PSAPL1Q6NUJ1 521 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 NCEH1Q6PIU2 408 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 ZNF783Q6ZMS7 281 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 LARP4Q71RC2 724 aaKnown RBP eCLIP17.01■□□□□ 0.312e-6■□□□□ 11.3
PHGDH-211ENST00000641213 RAB44Q7Z6P3 723 aaPredicted RBP17.01■□□□□ 0.31
PHGDH-211ENST00000641213 DNAJB7Q7Z6W7 309 aaPredicted RBP17.01■□□□□ 0.31
PHGDH-211ENST00000641213 CARNMT1Q8N4J0 409 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 MICAL1Q8TDZ2 1067 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 KIAA1191Q96A73 305 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 BIRC8Q96P09 236 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 ASB2Q96Q27 587 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 LHX3Q9UBR4 397 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 FKBPLQ9UIM3 349 aa17.01■□□□□ 0.31
PHGDH-211ENST00000641213 KIAA1671Q9BY89 1806 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 LCHNA4D1U4 455 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 A6NHS1 94 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 H0Y626 953 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 PSMD12O00232 456 aaPredicted RBP17■□□□□ 0.31
PHGDH-211ENST00000641213 PPP6CO00743 305 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 SMAD3P84022 425 aaKnown RBP17■□□□□ 0.31
PHGDH-211ENST00000641213 FASTKQ14296 549 aaKnown RBP17■□□□□ 0.31
PHGDH-211ENST00000641213 PTPRRQ15256 657 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 SLC39A5Q6ZMH5 540 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 PIANPQ8IYJ0 282 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 CLYBLQ8N0X4 340 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 EFHBQ8N7U6 833 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 TMA16Q96EY4 203 aaKnown RBP17■□□□□ 0.31
PHGDH-211ENST00000641213 C3orf30Q96M34 536 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 SLC22A12Q96S37 553 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 MRPL1Q9BYD6 325 aaKnown RBP17■□□□□ 0.31
PHGDH-211ENST00000641213 IKZF3Q9UKT9 509 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 OGDHLQ9ULD0 1010 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 ATP6AP2A0A1C7CYW4 349 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 PRRG1O14668 218 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 KERAO60938 352 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 ATP6AP2O75787 350 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 FGF4P08620 206 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 GFAPP14136 432 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 MC4RP32245 332 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 MSX2P35548 267 aaPredicted RBP17■□□□□ 0.31
PHGDH-211ENST00000641213 RAD51Q06609 339 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 RAB33AQ14088 237 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 MAPRE2Q15555 327 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 PTPRNQ16849 979 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 AGKQ53H12 422 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 LPCAT4Q643R3 524 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 SLC39A11Q8N1S5 342 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 STAG3L4Q8TBR4 150 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 VWCEQ96DN2 955 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 C19orf60Q96EN9 201 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 TMEM169Q96HH4 297 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 NSUN5Q96P11 429 aaKnown RBP17■□□□□ 0.31
PHGDH-211ENST00000641213 GPR21Q99679 349 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 FEM1AQ9BSK4 669 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 BPIFA1Q9NP55 256 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 MID1IP1Q9NPA3 183 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 GEMIN8Q9NWZ8 242 aaKnown RBP17■□□□□ 0.31
PHGDH-211ENST00000641213 UTP6Q9NYH9 597 aaKnown RBP17■□□□□ 0.31
PHGDH-211ENST00000641213 GALPQ9UBC7 116 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 DNAJC15Q9Y5T4 150 aa17■□□□□ 0.31
PHGDH-211ENST00000641213 OAS3Q9Y6K5 1087 aaKnown RBP17■□□□□ 0.31
PHGDH-211ENST00000641213 SCN8AQ9UQD0 1980 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 FBP2O00757 339 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 MT-CO1P00395 513 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 ME2P23368 584 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 ATP6V0D1P61421 351 aa16.99■□□□□ 0.31
PHGDH-211ENST00000641213 MS4A2Q01362 244 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms