RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 HLA-DPA1P20036 260 aa26.59■■□□□ 1.85
VEGFA-231ENST00000640499 STIP1P31948 543 aaKnown RBP26.59■■□□□ 1.85
VEGFA-231ENST00000640499 SRP54P61011 504 aaKnown RBP26.59■■□□□ 1.85
VEGFA-231ENST00000640499 HNRNPKP61978 463 aaKnown RBP eCLIP26.59■■□□□ 1.858e-7■■■■□ 21.9
VEGFA-231ENST00000640499 KCTD19Q17RG1 926 aaPredicted RBP26.59■■□□□ 1.85
VEGFA-231ENST00000640499 LONRF2Q1L5Z9 754 aa26.59■■□□□ 1.85
VEGFA-231ENST00000640499 HENMT1Q5T8I9 393 aaKnown RBP26.59■■□□□ 1.85
VEGFA-231ENST00000640499 FAXCQ5TGI0 409 aa26.59■■□□□ 1.85
VEGFA-231ENST00000640499 RAET1GQ6H3X3 334 aa26.59■■□□□ 1.85
VEGFA-231ENST00000640499 PDXPQ96GD0 296 aa26.59■■□□□ 1.85
VEGFA-231ENST00000640499 LRRC61Q9BV99 259 aa26.59■■□□□ 1.85
VEGFA-231ENST00000640499 CLPBQ9H078 707 aa26.59■■□□□ 1.85
VEGFA-231ENST00000640499 ZNF148Q9UQR1 794 aa26.59■■□□□ 1.85
VEGFA-231ENST00000640499 AAR2Q9Y312 384 aaKnown RBP26.59■■□□□ 1.85
VEGFA-231ENST00000640499 RGSL1A5PLK6 1076 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 FADS2P1A8MWK0 482 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 CACNB4O00305 520 aaPredicted RBP26.58■■□□□ 1.85
VEGFA-231ENST00000640499 SCAMP1O15126 338 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 KIF5CO60282 957 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 USP12O75317 370 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 CEACAM5P06731 702 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 CELA2BP08218 269 aaPredicted RBP26.58■■□□□ 1.85
VEGFA-231ENST00000640499 MYCLP1P12525 358 aaPredicted RBP26.58■■□□□ 1.85
VEGFA-231ENST00000640499 GPR1P46091 355 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 HK3P52790 923 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 SIM1P81133 766 aaPredicted RBP26.58■■□□□ 1.85
VEGFA-231ENST00000640499 PPARDQ03181 441 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 P3H1Q32P28 736 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 ADAMTSL4Q6UY14 1074 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 ARHGEF18Q6ZSZ5 1173 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 SLCO6A1Q86UG4 719 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 TAB3Q8N5C8 712 aaPredicted RBP26.58■■□□□ 1.85
VEGFA-231ENST00000640499 OR56A4Q8NGH8 313 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 CCHCR1Q8TD31 782 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 PBKQ96KB5 322 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 FRMD8Q9BZ67 464 aaPredicted RBP26.58■■□□□ 1.85
VEGFA-231ENST00000640499 FAM83DQ9H4H8 585 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 SMARCAL1Q9NZC9 954 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 DRG1Q9Y295 367 aaKnown RBP26.58■■□□□ 1.85
VEGFA-231ENST00000640499 ZKSCAN5Q9Y2L8 839 aa26.58■■□□□ 1.85
VEGFA-231ENST00000640499 GOLGA6CA6NDK9 693 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 GOLGA6BA6NDN3 693 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 SIGLEC6O43699 453 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 FGF1P05230 155 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 ZSCAN5DPP0CG00 497 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 GOLGA6DP0CG33 693 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 BPIP17213 487 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 HTR1BP28222 390 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 KCNJ1P48048 391 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 C1orf61Q13536 156 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 PRPSAP1Q14558 356 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 HID1Q8IV36 788 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 COX14Q96I36 57 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 FSD1LQ9BXM9 530 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 GPR63Q9BZJ6 419 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 GOLGA6AQ9NYA3 693 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 PKD2L2Q9NZM6 624 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 KLQ9UEF7 1012 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 APOBEC3BQ9UH17 382 aaKnown RBP26.57■■□□□ 1.84
VEGFA-231ENST00000640499 TTC7AQ9ULT0 858 aaPredicted RBP26.57■■□□□ 1.84
VEGFA-231ENST00000640499 DGKBQ9Y6T7 804 aa26.57■■□□□ 1.84
VEGFA-231ENST00000640499 TNFRSF10CO14798 259 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 FANCGO15287 622 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 FFAR2O15552 330 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 SLC4A1P02730 911 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 POLD2P49005 469 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 PRRT3Q5FWE3 981 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 RD3Q7Z3Z2 195 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 TRIM74Q86UV6 250 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 OR4C6Q8NH72 309 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 LMX1AQ8TE12 382 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 BTN2A2Q8WVV5 523 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 TBATAQ96M53 351 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 SRPK1Q96SB4 655 aaKnown RBP26.56■■□□□ 1.84
VEGFA-231ENST00000640499 OSBPL9Q96SU4 736 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 CDC6Q99741 560 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 ARNT2Q9HBZ2 717 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 BPIFA1Q9NP55 256 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 PHPT1Q9NRX4 125 aaPredicted RBP26.56■■□□□ 1.84
VEGFA-231ENST00000640499 IL17CQ9P0M4 197 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 NFKBIL1Q9UBC1 381 aaPredicted RBP26.56■■□□□ 1.84
VEGFA-231ENST00000640499 SNX12Q9UMY4 172 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 CSNK1G3Q9Y6M4 447 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 NCOR2Q9Y618 2525 aa26.56■■□□□ 1.84
VEGFA-231ENST00000640499 ZNF185O15231 689 aa26.55■■□□□ 1.84
VEGFA-231ENST00000640499 AQP9O43315 295 aa26.55■■□□□ 1.84
VEGFA-231ENST00000640499 DKK1O94907 266 aa26.55■■□□□ 1.84
VEGFA-231ENST00000640499 ADRB1P08588 477 aa26.55■■□□□ 1.84
VEGFA-231ENST00000640499 HMGCLP35914 325 aa26.55■■□□□ 1.84
VEGFA-231ENST00000640499 PTPRCAPQ14761 206 aa26.55■■□□□ 1.84
VEGFA-231ENST00000640499 PROX2Q3B8N5 592 aa26.55■■□□□ 1.84
VEGFA-231ENST00000640499 PDCD7Q8N8D1 485 aaKnown RBP26.55■■□□□ 1.84
VEGFA-231ENST00000640499 BLOC1S5Q8TDH9 187 aa26.55■■□□□ 1.84
VEGFA-231ENST00000640499 TBL1YQ9BQ87 522 aa26.55■■□□□ 1.84
VEGFA-231ENST00000640499 TRABDQ9H4I3 376 aa26.55■■□□□ 1.84
VEGFA-231ENST00000640499 ETNK1Q9HBU6 452 aa26.55■■□□□ 1.84
VEGFA-231ENST00000640499 SPASTQ9UBP0 616 aa26.55■■□□□ 1.84
VEGFA-231ENST00000640499 SLC17A4Q9Y2C5 497 aa26.55■■□□□ 1.84
VEGFA-231ENST00000640499 LY6G6EA0A0G2JKS1 128 aa26.54■■□□□ 1.84
VEGFA-231ENST00000640499 H3BM21 787 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms