RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 COL4A3Q01955 1670 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 UQCRHLA0A096LP55 91 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 C2CD4DB7Z1M9 353 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 ARNTLO00327 626 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 KPNA5O15131 536 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 ATXN7O15265 892 aaPredicted RBP8.04□□□□□ -1.12
SCARB2-220ENST00000640076 CHADO15335 359 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 OPHN1O60890 802 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 TIPRLO75663 272 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 ZMPSTE24O75844 475 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 JCHAINP01591 159 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 UQCRHP07919 91 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 C5AR1P21730 350 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 GLDCP23378 1020 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 GDI1P31150 447 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 CD70P32970 193 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 GALNSP34059 522 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 ACTN2P35609 894 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 KRT20P35900 424 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 ECI1P42126 302 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 PLK1P53350 603 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 GAD2Q05329 585 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 SLC12A1Q13621 1099 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 HNRNPDQ14103 355 aaKnown RBP8.04□□□□□ -1.12
SCARB2-220ENST00000640076 SMAD2Q15796 467 aaKnown RBP8.04□□□□□ -1.12
SCARB2-220ENST00000640076 GAB4Q2WGN9 574 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 TEX44Q53QW1 395 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 ANKRD20A2Q5SQ80 823 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 ANKRD20A1Q5TYW2 823 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 ANKRD20A3Q5VUR7 823 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 WDR93Q6P2C0 686 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 USP45Q70EL2 814 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 C12orf40Q86WS4 652 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 IFT20Q8IY31 132 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 APCDD1Q8J025 514 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 DCAF4L2Q8NA75 395 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 CASKIN2Q8WXE0 1202 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 SNF8Q96H20 258 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 VAT1Q99536 393 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 ZFYVE21Q9BQ24 234 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 TRMT61BQ9BVS5 477 aaKnown RBP8.04□□□□□ -1.12
SCARB2-220ENST00000640076 PHF7Q9BWX1 381 aaPredicted RBP8.04□□□□□ -1.12
SCARB2-220ENST00000640076 TMEM120AQ9BXJ8 343 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 PARD6BQ9BYG5 372 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 SLC2A11Q9BYW1 496 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 TRIT1Q9H3H1 467 aaKnown RBP8.04□□□□□ -1.12
SCARB2-220ENST00000640076 ABCB8Q9NUT2 735 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 GRHL1Q9NZI5 618 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 PAK5Q9P286 719 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 KLHL8Q9P2G9 620 aaPredicted RBP8.04□□□□□ -1.12
SCARB2-220ENST00000640076 INTS6Q9UL03 887 aaKnown RBP8.04□□□□□ -1.12
SCARB2-220ENST00000640076 RAB21Q9UL25 225 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 HPCAL4Q9UM19 191 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 RHPN2P1A8MT19 583 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 TP73O15350 636 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 SNAP91O60641 907 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 SEC31AO94979 1220 aaKnown RBP8.04□□□□□ -1.12
SCARB2-220ENST00000640076 TUBBP07437 444 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 NEFHP12036 1026 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 TNFRSF8P28908 595 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 HPDP32754 393 aaPredicted RBP8.04□□□□□ -1.12
SCARB2-220ENST00000640076 CARSP49589 748 aaKnown RBP8.04□□□□□ -1.12
SCARB2-220ENST00000640076 VSNL1P62760 191 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 PHC1P78364 1004 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 ARF5P84085 180 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 CYP4F3Q08477 520 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 SLC10A7Q0GE19 358 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 CUL1Q13616 776 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 RUNX3Q13761 415 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 MARC1Q5VT66 337 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 PGBD2Q6P3X8 592 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 C4orf22Q6V702 233 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 LEKR1Q6ZMV7 388 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 LIAT1Q6ZQX7 453 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 ARHGEF18Q6ZSZ5 1173 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 PID1Q7Z2X4 250 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 VWA5B2Q8N398 1253 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 TEX26Q8N6G2 289 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.04□□□□□ -1.12
SCARB2-220ENST00000640076 NAT16Q8N8M0 369 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 ADAMTS18Q8TE60 1221 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 GIMAP1Q8WWP7 306 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 LRRC45Q96CN5 670 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 ZNF599Q96NL3 588 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 AGAP3Q96P47 875 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 SLC30A3Q99726 388 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 LRFN3Q9BTN0 628 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 FAM114A2Q9NRY5 505 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 GTSE1Q9NYZ3 720 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 VPS51Q9UID3 782 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 GGA2Q9UJY4 613 aa8.04□□□□□ -1.12
SCARB2-220ENST00000640076 DNALI1O14645 258 aaPredicted RBP8.03□□□□□ -1.12
SCARB2-220ENST00000640076 TRIM24O15164 1050 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 TULP3O75386 442 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 SLITRK5O94991 958 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 METTL18O95568 372 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 CISD3P0C7P0 127 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 ECHS1P30084 290 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 CD68P34810 354 aaPredicted RBP8.03□□□□□ -1.12
SCARB2-220ENST00000640076 CALCOCO2Q13137 446 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms