RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 NEXNQ0ZGT2 675 aa4.67□□□□□ -1.66
CCDC7-216ENST00000640058 BIRC3Q13489 604 aa4.67□□□□□ -1.66
CCDC7-216ENST00000640058 KRT24Q2M2I5 525 aa4.67□□□□□ -1.66
CCDC7-216ENST00000640058 ZNF280DQ6N043 979 aa4.67□□□□□ -1.66
CCDC7-216ENST00000640058 METTL27Q8N6F8 245 aaPredicted RBP4.67□□□□□ -1.66
CCDC7-216ENST00000640058 PCDH20Q8N6Y1 951 aaKnown RBP4.67□□□□□ -1.66
CCDC7-216ENST00000640058 CADM4Q8NFZ8 388 aa4.67□□□□□ -1.66
CCDC7-216ENST00000640058 TMEM255BQ8WV15 326 aa4.67□□□□□ -1.66
CCDC7-216ENST00000640058 SLC41A2Q96JW4 573 aa4.67□□□□□ -1.66
CCDC7-216ENST00000640058 SH3GL2Q99962 352 aa4.67□□□□□ -1.66
CCDC7-216ENST00000640058 SLC6A13Q9NSD5 602 aa4.67□□□□□ -1.66
CCDC7-216ENST00000640058 KCND2Q9NZV8 630 aa4.67□□□□□ -1.66
CCDC7-216ENST00000640058 AAR2Q9Y312 384 aaKnown RBP4.67□□□□□ -1.66
CCDC7-216ENST00000640058 CEPT1Q9Y6K0 416 aa4.67□□□□□ -1.66
CCDC7-216ENST00000640058 USP17L23D6RBM5 183 aa4.66□□□□□ -1.66
CCDC7-216ENST00000640058 AMBPP02760 352 aa4.66□□□□□ -1.66
CCDC7-216ENST00000640058 PAFAH1B1P43034 410 aa4.66□□□□□ -1.66
CCDC7-216ENST00000640058 MAPK9P45984 424 aa4.66□□□□□ -1.66
CCDC7-216ENST00000640058 GABRB2P47870 512 aa4.66□□□□□ -1.66
CCDC7-216ENST00000640058 ALG11Q2TAA5 492 aa4.66□□□□□ -1.66
CCDC7-216ENST00000640058 TRNP1Q6NT89 227 aa4.66□□□□□ -1.66
CCDC7-216ENST00000640058 PQLC2Q6ZP29 291 aa4.66□□□□□ -1.66
CCDC7-216ENST00000640058 NFE4Q86UQ8 179 aa4.66□□□□□ -1.66
CCDC7-216ENST00000640058 RNF125Q96EQ8 232 aa4.66□□□□□ -1.66
CCDC7-216ENST00000640058 GRAMD2BQ96HH9 432 aa4.66□□□□□ -1.66
CCDC7-216ENST00000640058 IFIH1Q9BYX4 1025 aaKnown RBP4.66□□□□□ -1.66
CCDC7-216ENST00000640058 SEBOXQ9HB31 216 aaPredicted RBP4.66□□□□□ -1.66
CCDC7-216ENST00000640058 PPP1R14DQ9NXH3 145 aa4.66□□□□□ -1.66
CCDC7-216ENST00000640058 SARDHQ9UL12 918 aa4.66□□□□□ -1.66
CCDC7-216ENST00000640058 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 LILRA5A6NI73 299 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 FAM72CH0Y354 149 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 TIMP3P35625 211 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 CCT5P48643 541 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 PPM1FP49593 454 aaPredicted RBP4.65□□□□□ -1.67
CCDC7-216ENST00000640058 CTCFP49711 727 aaPredicted RBP4.65□□□□□ -1.67
CCDC7-216ENST00000640058 FOXM1Q08050 763 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 FOXD4Q12950 439 aaPredicted RBP4.65□□□□□ -1.67
CCDC7-216ENST00000640058 GTF2H2Q13888 395 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 FGFBP1Q14512 234 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 SLC9C2Q5TAH2 1124 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 FAM72AQ5TYM5 149 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 NAA35Q5VZE5 725 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 PLEKHA7Q6IQ23 1121 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 FAM72DQ6L9T8 149 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 GTF2H2CQ6P1K8 395 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 RAD9BQ6WBX8 426 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 ZNF852Q6ZMS4 543 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 ASB18Q6ZVZ8 466 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 FAM72BQ86X60 149 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 HTRA1Q92743 480 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 RHBDF1Q96CC6 855 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 SYT17Q9BSW7 474 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 POLR3CQ9BUI4 534 aaPredicted RBP4.65□□□□□ -1.67
CCDC7-216ENST00000640058 LUZP4Q9P127 313 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 PADI3Q9ULW8 664 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 CAMK2AQ9UQM7 478 aa4.65□□□□□ -1.67
CCDC7-216ENST00000640058 LRRC53A6NM62 1247 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 TAF4O00268 1085 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 WDR1O75083 606 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 APOHP02749 345 aaPredicted RBP4.64□□□□□ -1.67
CCDC7-216ENST00000640058 PRSS1P07477 247 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 IL7RP16871 459 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 CDAP32320 146 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 ABCD1P33897 745 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 ATP12AP54707 1039 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 VAMP2P63027 116 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 CSNK2A1P68400 391 aaPredicted RBP4.64□□□□□ -1.67
CCDC7-216ENST00000640058 SREBF2Q12772 1141 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 SIRPB2Q5JXA9 342 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 PDSS1Q5T2R2 415 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 ACVR1CQ8NER5 493 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 CSNK2A3Q8NEV1 391 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 PIGTQ969N2 578 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 WBP2Q969T9 261 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 ZNF501Q96CX3 271 aaPredicted RBP4.64□□□□□ -1.67
CCDC7-216ENST00000640058 KIF9Q9HAQ2 790 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 SAGE1Q9NXZ1 904 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 DDX43Q9NXZ2 648 aaKnown RBP4.64□□□□□ -1.67
CCDC7-216ENST00000640058 MKLN1Q9UL63 735 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 TCF19Q9Y242 345 aa4.64□□□□□ -1.67
CCDC7-216ENST00000640058 TTC36A6NLP5 189 aa4.63□□□□□ -1.67
CCDC7-216ENST00000640058 NCAM2O15394 837 aa4.63□□□□□ -1.67
CCDC7-216ENST00000640058 CD53P19397 219 aa4.63□□□□□ -1.67
CCDC7-216ENST00000640058 ABCD3P28288 659 aa4.63□□□□□ -1.67
CCDC7-216ENST00000640058 CDKN1AP38936 164 aa4.63□□□□□ -1.67
CCDC7-216ENST00000640058 AMPHP49418 695 aa4.63□□□□□ -1.67
CCDC7-216ENST00000640058 TAS2R38P59533 333 aa4.63□□□□□ -1.67
CCDC7-216ENST00000640058 DRAP1Q14919 205 aaPredicted RBP4.63□□□□□ -1.67
CCDC7-216ENST00000640058 SIGIRRQ6IA17 410 aa4.63□□□□□ -1.67
CCDC7-216ENST00000640058 ZNF354CQ86Y25 554 aa4.63□□□□□ -1.67
CCDC7-216ENST00000640058 BEST3Q8N1M1 668 aa4.63□□□□□ -1.67
CCDC7-216ENST00000640058 GRAPLQ8TC17 118 aaPredicted RBP4.63□□□□□ -1.67
CCDC7-216ENST00000640058 SLC38A5Q8WUX1 472 aa4.63□□□□□ -1.67
CCDC7-216ENST00000640058 DUX3Q96PT4 197 aa4.63□□□□□ -1.67
CCDC7-216ENST00000640058 EIF2AK1Q9BQI3 630 aaKnown RBP4.63□□□□□ -1.67
CCDC7-216ENST00000640058 TMEM47Q9BQJ4 181 aa4.63□□□□□ -1.67
CCDC7-216ENST00000640058 ZNF696Q9H7X3 374 aa4.63□□□□□ -1.67
CCDC7-216ENST00000640058 SLC28A3Q9HAS3 691 aa4.63□□□□□ -1.67
CCDC7-216ENST00000640058 PCDHB16Q9NRJ7 776 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms